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SCNpilot_cont_500_bf_scaffold_7841

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Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_500_bf_scaffold_7841_1
Devosia sp. 17-2-E-8, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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3..200
DNA (198bp) protein (66aa)
30S ribosomal protein S18 n=1 Tax=Rhodovulum sp. PH10 RepID=J5PN26_9RHOB
30S ribosomal protein S18 {ECO:0000256|HAMAP-Rule:MF_00270}; TaxID=1535287 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. 17-2-E-8.;"
ribosomal protein S18
SCNpilot_cont_500_bf_scaffold_7841_2
Devosia sp. DDB001, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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337..915
DNA (579bp) protein (193aa)
50S ribosomal protein L9 n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RGI3_PELHB
50S ribosomal protein L9 {ECO:0000256|HAMAP-Rule:MF_00503}; TaxID=1228055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. DDB001.;"
50S ribosomal protein L9; K02939 large subunit ribosomal protein L9
SCNpilot_cont_500_bf_scaffold_7841_3
BJP_IG2157_Desulfuromonadales_56_134, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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1282..1908
DNA (627bp) protein (209aa)
Outer membrane family protein (Fragment) n=1 Tax=Acetobacteraceae bacterium AT-5844 RepID=H0A6S4_9PROT
Tax=BJP_IG2157_Desulfuromonadales_56_134
SCNpilot_cont_500_bf_scaffold_7841_4
Nitratireductor pacificus, Nitratireductor, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1963..2439)
DNA (477bp) protein (159aa)
Uncharacterized protein n=1 Tax=Nitratireductor pacificus pht-3B RepID=K2LHI7_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:EKF17199.1}; TaxID=391937 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitratireductor pacificus pht-3B.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_7841_5
Nocardia farcinica, Nocardia, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

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2560..3315
DNA (756bp) protein (252aa)
Putative transcriptional regulator n=1 Tax=Nocardia farcinica (strain IFM 10152) RepID=Q5YQU7_NOCFA
transcriptional regulator
Putative transcriptional regulator {ECO:0000313|EMBL:BAD59444.1}; TaxID=247156 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Nocardia.;" source="Nocardia farcinica (strain IFM 10152).;"
SCNpilot_cont_500_bf_scaffold_7841_6
Phaeobacter gallaeciensis, Phaeobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3312..3845)
DNA (534bp) protein (178aa)
Putative cytochrome b561 n=1 Tax=Phaeobacter gallaeciensis (strain 2.10) RepID=I7ERX8_PHAG2
cytochrome b561
Putative cytochrome b561 {ECO:0000313|EMBL:AFO88390.1}; TaxID=383629 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Phaeobacter.;" source="Phaeobacter gallaeciensis (strain 2.10) (Roseobacter gallaeciensis).;"
SCNpilot_cont_500_bf_scaffold_7841_7
Devosia psychrophila, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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3919..4353
DNA (435bp) protein (145aa)
Transcriptional regulator, MarR family n=1 Tax=Rhodomicrobium vannielii (strain ATCC 17100 / ATH 3.1.1 / DSM 162 / LMG 4299) RepID=E3I2P1_RHOVT
MarR family transcriptional regulator
MarR family transcriptional regulator {ECO:0000313|EMBL:KKC31674.1}; TaxID=728005 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia psychrophila.;"
SCNpilot_cont_500_bf_scaffold_7841_8
R_Rhodospirillales_65_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(4518..5261)
DNA (744bp) protein (248aa)
Replicative DNA helicase n=1 Tax=Hoeflea phototrophica DFL-43 RepID=A9DB55_9RHIZ
Tax=RIFCSPLOWO2_01_FULL_Rhodospirillales_65_14_curated
SCNpilot_cont_500_bf_scaffold_7841_9
Devosia limi, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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5326..5919
DNA (594bp) protein (198aa)
replicative DNA helicase; K02314 replicative DNA helicase [EC:3.6.4.12]
Replicative DNA helicase n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RGI2_PELHB
DNA helicase {ECO:0000313|EMBL:KKB85781.1}; TaxID=1121477 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia limi DSM 17137.;"
SCNpilot_cont_500_bf_scaffold_7841_10
Devosia limi, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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5922..7058
DNA (1137bp) protein (379aa)
Alanine racemase {ECO:0000256|HAMAP-Rule:MF_01201}; EC=5.1.1.1 {ECO:0000256|HAMAP-Rule:MF_01201};; TaxID=1121477 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia limi DSM 17137.;"
alanine racemase; K01775 alanine racemase [EC:5.1.1.1]
Alanine racemase n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RFZ7_PELHB
Displaying 10 items

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