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SCNpilot_cont_500_bf_scaffold_9648

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Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_500_bf_scaffold_9648_1
Devosia sp. LC5, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3..251)
DNA (249bp) protein (83aa)
Protein-export protein SecB n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4R7R3_PELHB
Protein-export protein SecB {ECO:0000256|HAMAP-Rule:MF_00821}; TaxID=1502724 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. LC5.;"
protein export cytoplasm chaperone protein (SecB, maintains protein to be exported in unfolded state); K03071 preprotein translocase subunit SecB
SCNpilot_cont_500_bf_scaffold_9648_2
Devosia sp. LC5, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(326..811)
DNA (486bp) protein (162aa)
hypothetical protein n=1 Tax=Ahrensia kielensis RepID=UPI0003694650
FxsA cytoplasmic membrane protein {ECO:0000313|EMBL:KFC68665.1}; TaxID=1502724 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. LC5.;"
FxsA cytoplasmic membrane protein; K07113 UPF0716 protein FxsA
SCNpilot_cont_500_bf_scaffold_9648_3
Devosia sp. 17-2-E-8, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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940..1656
DNA (717bp) protein (239aa)
Transporter n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4R7R5_PELHB
Uncharacterized protein {ECO:0000313|EMBL:KFL26149.1}; TaxID=1535287 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. 17-2-E-8.;"
transporter
SCNpilot_cont_500_bf_scaffold_9648_4
Devosia geojensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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1907..2188
DNA (282bp) protein (94aa)
Smr protein/MutS2 n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4R7R6_PELHB
Uncharacterized protein {ECO:0000313|EMBL:KKB08417.1}; TaxID=443610 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia geojensis.;"
Smr protein/MutS2
SCNpilot_cont_500_bf_scaffold_9648_5
Devosia sp. 17-2-E-8, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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2185..2544
DNA (360bp) protein (120aa)
XRE family transcriptional regulator n=1 Tax=Roseibium sp. TrichSKD4 RepID=E2CH94_9RHOB
XRE family transcriptional regulator {ECO:0000313|EMBL:KFL26151.1}; TaxID=1535287 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. 17-2-E-8.;"
XRE family transcriptional regulator
SCNpilot_cont_500_bf_scaffold_9648_trna_1
unknown

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2779..2849
DNA (71bp)
transferRNA
SCNpilot_cont_500_bf_scaffold_9648_trna_2
unknown

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2852..2925
DNA (74bp)
transferRNA
SCNpilot_cont_500_bf_scaffold_9648_6
Mesorhizobium plurifarium, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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3315..4463
DNA (1149bp) protein (383aa)
Mlr1172 protein n=1 Tax=Rhizobium loti (strain MAFF303099) RepID=Q98L54_RHILO
Uncharacterized protein {ECO:0000313|EMBL:CDX25930.1}; TaxID=69974 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium plurifarium.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_9648_7
unknown

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4573..5151
DNA (579bp) protein (193aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_9648_8
unknown

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5141..5398
DNA (258bp) protein (86aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_9648_9
Devosia limi, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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5529..6311
DNA (783bp) protein (261aa)
ABC transporter related n=1 Tax=Rhizobium leguminosarum bv. trifolii (strain WSM1325) RepID=C6ASM7_RHILS
Multidrug ABC transporter ATP-binding protein {ECO:0000313|EMBL:KKB77085.1}; TaxID=1121477 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia limi DSM 17137.;"
ABC transporter; K06147 ATP-binding cassette, subfamily B, bacterial
Displaying 11 items

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