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SCNpilot_cont_500_bf_scaffold_13671

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Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_500_bf_scaffold_13671_1
Mesorhizobium sp. ORS3359, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(13..891)
DNA (879bp) protein (293aa)
Uncharacterized protein n=1 Tax=Rhizobium sp. AP16 RepID=J2L4X7_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:CDX29582.1}; TaxID=1505933 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. ORS3359.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_13671_2
Tanticharoenia sakaeratensis, Tanticharoenia, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(888..1496)
DNA (609bp) protein (203aa)
Putative uncharacterized protein n=1 Tax=Gluconobacter morbifer G707 RepID=G6XEV2_9PROT
Oxidoreductase protein {ECO:0000313|EMBL:GAN54332.1}; TaxID=1231623 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Tanticharoenia.;" source="Tanticharoenia sakaeratensis NBRC 103193.;"
Rieske (2Fe-2S) domain protein
SCNpilot_cont_500_bf_scaffold_13671_3
Devosia riboflavina, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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1784..2887
DNA (1104bp) protein (368aa)
ABC transporter substrate-binding protein n=1 Tax=Polymorphum gilvum (strain LMG 25793 / CGMCC 1.9160 / SL003B-26A1) RepID=F2IWR9_POLGS rbh
ABC transporter substrate-binding protein {ECO:0000313|EMBL:KFL32664.1}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
ABC transporter substrate-binding protein; K02058 simple sugar transport system substrate-binding protein rbh
SCNpilot_cont_500_bf_scaffold_13671_4
unknown

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comp(3242..3517)
DNA (276bp) protein (92aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_13671_5
Devosia chinhatensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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3532..4140
DNA (609bp) protein (203aa)
Probable sugar ABC transporter, permease protein n=1 Tax=Polymorphum gilvum (strain LMG 25793 / CGMCC 1.9160 / SL003B-26A1) RepID=F2IWR8_POLGS
ABC transporter permease {ECO:0000313|EMBL:KKB09630.1}; TaxID=429727 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia chinhatensis.;"
sugar ABC transporter permease; K02057 simple sugar transport system permease protein
SCNpilot_cont_500_bf_scaffold_13671_6
Devosia chinhatensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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4140..5711
DNA (1572bp) protein (524aa)
Hypothetical isochorismatase family protein n=1 Tax=Polymorphum gilvum (strain LMG 25793 / CGMCC 1.9160 / SL003B-26A1) RepID=F2IWR5_POLGS
Cysteine hydrolase {ECO:0000313|EMBL:KKB09633.1}; TaxID=429727 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia chinhatensis.;"
isochorismatase
SCNpilot_cont_500_bf_scaffold_13671_7
Devosia riboflavina, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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5890..6552
DNA (663bp) protein (221aa)
ABC transporter ATPase; K02056 simple sugar transport system ATP-binding protein [EC:3.6.3.17]
Predicted ABC-type uncharacterized transport system, ATPase component n=1 Tax=Polymorphum gilvum (strain LMG 25793 / CGMCC 1.9160 / SL003B-26A1) RepID=F2IWR4_POLGS
ABC transporter ATP-binding protein {ECO:0000313|EMBL:KFL32660.1}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
SCNpilot_cont_500_bf_scaffold_13671_8
Devosia riboflavina, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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6525..7031
DNA (507bp) protein (169aa)
ABC transporter ATPase; K02056 simple sugar transport system ATP-binding protein [EC:3.6.3.17]
Predicted ABC-type uncharacterized transport system, ATPase component n=1 Tax=Polymorphum gilvum (strain LMG 25793 / CGMCC 1.9160 / SL003B-26A1) RepID=F2IWR4_POLGS
ABC transporter ATP-binding protein {ECO:0000313|EMBL:KFL32660.1}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
SCNpilot_cont_500_bf_scaffold_13671_9
Devosia riboflavina, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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7458..8123
DNA (666bp) protein (222aa)
Isochorismatase hydrolase n=1 Tax=Burkholderia gladioli (strain BSR3) RepID=F2L8Q8_BURGS
Cysteine hydrolase {ECO:0000313|EMBL:KFL32659.1}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
isochorismatase hydrolase
SCNpilot_cont_500_bf_scaffold_13671_10
Bradyrhizobium japonicum, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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8120..8506
DNA (387bp) protein (129aa)
Uncharacterized protein n=1 Tax=Bradyrhizobium japonicum USDA 6 RepID=G7DMP1_BRAJP
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHY55278.1}; TaxID=476282 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium japonicum SEMIA 5079.;"
SCNpilot_cont_500_bf_scaffold_13671_11
Devosia chinhatensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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8547..8942
DNA (396bp) protein (132aa)
Transcriptional regulator, GntR family n=1 Tax=Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2) RepID=A7IPC8_XANP2
GntR family transcriptional regulator {ECO:0000313|EMBL:KKB09638.1}; TaxID=429727 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia chinhatensis.;"
GntR family transcriptional regulator
Displaying 11 items

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