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SCNpilot_cont_500_bf_scaffold_11967

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Displaying 8 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_500_bf_scaffold_11967_1
Devosia sp. LC5, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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2..376
DNA (375bp) protein (125aa)
Nitrogen assimilation regulatory protein NtrX n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4R902_PELHB
Nitrogen assimilation regulatory protein NtrX {ECO:0000313|EMBL:KFC72397.1}; TaxID=1502724 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. LC5.;"
nitrogen assimilation regulatory protein NtrX; K13599 two-component system, NtrC family, nitrogen regulation response regulator NtrX
SCNpilot_cont_500_bf_scaffold_11967_2
Devosia insulae, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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651..959
DNA (309bp) protein (103aa)
RNA-binding protein Hfq n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4R905_PELHB
RNA-binding protein Hfq {ECO:0000256|HAMAP-Rule:MF_00436, ECO:0000256|SAAS:SAAS00067493}; TaxID=1116389 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia insulae DS-56.;"
RNA-binding protein Hfq; K03666 host factor-I protein
SCNpilot_cont_500_bf_scaffold_11967_3
Devosia sp. LC5, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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943..2274
DNA (1332bp) protein (444aa)
GTPase HflX n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4R906_PELHB rbh
GTPase HflX {ECO:0000256|HAMAP-Rule:MF_00900}; GTP-binding protein HflX {ECO:0000256|HAMAP-Rule:MF_00900}; TaxID=1502724 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. LC5.;"
GTP-binding protein HflX; K03665 GTP-binding protein HflX rbh
SCNpilot_cont_500_bf_scaffold_11967_4
Devosia sp. 17-2-E-8, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2475..3281)
DNA (807bp) protein (269aa)
Nucleoside triphosphate hydrolase {ECO:0000313|EMBL:KFL25992.1}; EC=3.6.1.19 {ECO:0000313|EMBL:KFL25992.1};; TaxID=1535287 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. 17-2-E-8.;"
nucleoside triphosphate pyrophosphohydrolase MazG; K04765 ATP diphosphatase [EC:3.6.1.8] rbh
Nucleoside triphosphate pyrophosphohydrolase MazG n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4R907_PELHB rbh
SCNpilot_cont_500_bf_scaffold_11967_5
Rhizobium sp. CF142, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3290..4027)
DNA (738bp) protein (246aa)
MG09718.4; hypothetical protein; K01726 [EC:4.2.1.-]
2-keto-4-pentenoate hydratase n=1 Tax=Rhizobium sp. CF142 RepID=J2B649_9RHIZ
2-keto-4-pentenoate hydratase {ECO:0000313|EMBL:EJJ31520.1}; TaxID=1144314 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. CF142.;"
SCNpilot_cont_500_bf_scaffold_11967_6
GWF2_Verrucomicrobia_62_7_curated, Verrucomicrobiae, Verrucomicrobia, Bacteria

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comp(4182..4706)
DNA (525bp) protein (175aa)
hypothetical protein n=1 Tax=Candidatus Poribacteria sp. WGA-4E RepID=UPI000379953B
Tax=GWF2_Verrucomicrobia_62_7_curated
SCNpilot_cont_500_bf_scaffold_11967_7
Devosia chinhatensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(5472..5852)
DNA (381bp) protein (127aa)
Putative translation initiation inhibitor, yjgF family n=1 Tax=Sinorhizobium meliloti GR4 RepID=M4IRM4_RHIML
Endoribonuclease L-PSP {ECO:0000313|EMBL:KKB09836.1}; TaxID=429727 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia chinhatensis.;"
Putative translation initiation inhibitor, yjgF family
SCNpilot_cont_500_bf_scaffold_11967_8
Devosia geojensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(5879..6355)
DNA (477bp) protein (159aa)
Metal-dependent hydrolases of the beta-lactamase superfamily I, PhnP protein n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4R9P1_PELHB
PhnP {ECO:0000313|EMBL:KKB08544.1}; TaxID=443610 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia geojensis.;"
metal-dependent hydrolase; K06167 PhnP protein
Displaying 8 items

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