ggKbase home page

SCNpilot_cont_500_bf_scaffold_23428

Search features with annotation key words

Displaying 6 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_500_bf_scaffold_23428_1
Rhizobium leguminosarum, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

111..488
DNA (378bp) protein (126aa)
DGPFAETKE family protein n=2 Tax=Rhizobium leguminosarum bv. trifolii RepID=B5ZVJ6_RHILW
Dehydrogenase {ECO:0000313|EMBL:AHF83223.1}; TaxID=754523 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium leguminosarum bv. trifolii WSM1689.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_23428_2
Pseudomonas stutzeri, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

485..1630
DNA (1146bp) protein (382aa)
ECF subfamily RNA polymerase sigma-70 factor n=1 Tax=Pseudomonas stutzeri DSM 10701 RepID=I6Z0B6_PSEST
ECF subfamily RNA polymerase sigma-70 factor
Uncharacterized protein {ECO:0000313|EMBL:AFN76302.1}; TaxID=1123519 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas stutzeri DSM 10701.;"
SCNpilot_cont_500_bf_scaffold_23428_3
Devosia insulae, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1909..2766)
DNA (858bp) protein (286aa)
glyoxylate reductase / glyoxylate reductase / hydroxypyruvate reductase; K00015 glyoxylate reductase [EC:1.1.1.26]
UPI0003CED86B related cluster n=1 Tax=unknown RepID=UPI0003CED86B
2-hydroxyacid dehydrogenase {ECO:0000313|EMBL:KKB81831.1}; TaxID=1116389 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia insulae DS-56.;"
SCNpilot_cont_500_bf_scaffold_23428_4
Devosia sp. 17-2-E-8, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2921..3493
DNA (573bp) protein (191aa)
Uncharacterized protein n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4R9A5_PELHB
Uncharacterized protein {ECO:0000313|EMBL:KFL27922.1}; TaxID=1535287 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. 17-2-E-8.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_23428_5
Devosia insulae, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3552..3998)
DNA (447bp) protein (149aa)
Iron-responsive regulator Irr n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4R9A7_PELHB
Fur family transcriptional regulator {ECO:0000313|EMBL:KKB81856.1}; TaxID=1116389 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia insulae DS-56.;"
iron-responsive regulator Irr; K09826 Fur family transcriptional regulator, iron response regulator
SCNpilot_cont_500_bf_scaffold_23428_6
Micavibrio aeruginosavorus, Micavibrio, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4189..4455
DNA (267bp) protein (89aa)
fabA; beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA (EC:4.2.1.-); K01716 3-hydroxydecanoyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.60]
3-hydroxydecanoyl-[acyl-carrier-protein] dehydratase {ECO:0000256|HAMAP-Rule:MF_00405, ECO:0000256|SAAS:SAAS00064161}; EC=4.2.1.59 {ECO:0000256|HAMAP-Rule:MF_00405, ECO:0000256|SAAS:SAAS00064166};; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabA {ECO:0000256|HAMAP-Rule:MF_00405}; Beta-hydroxydecanoyl thioester dehydrase {ECO:0000256|HAMAP-Rule:MF_00405}; Trans-2-decenoyl-[acyl-carrier-protein] isomerase {ECO:0000256|HAMAP-Rule:MF_00405}; TaxID=856793 species="Bacteria; Proteobacteria; Alphaproteobacte
3-hydroxydecanoyl-[acyl-carrier-protein] dehydratase n=1 Tax=Micavibrio aeruginosavorus (strain ARL-13) RepID=G2KN91_MICAA
Displaying 6 items

View Taxonomy