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SCNpilot_cont_500_bf_scaffold_23885

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Displaying 6 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_500_bf_scaffold_23885_1
Devosia sp. DDB001, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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3..260
DNA (258bp) protein (86aa)
Peptide deformylase {ECO:0000256|HAMAP-Rule:MF_00163, ECO:0000256|RuleBase:RU003335}; Short=PDF {ECO:0000256|HAMAP-Rule:MF_00163};; EC=3.5.1.88 {ECO:0000256|HAMAP-Rule:MF_00163, ECO:0000256|SAAS:SAAS00013131};; Polypeptide deformylase {ECO:0000256|HAMAP-Rule:MF_00163}; TaxID=1228055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. DDB001.;"
def2; peptide deformylase (EC:3.5.1.88); K01462 peptide deformylase [EC:3.5.1.88]
peptide deformylase n=1 Tax=Rhizobium mongolense RepID=UPI0003B6F8B9
SCNpilot_cont_500_bf_scaffold_23885_2
R_Sphingopyxis_65_20, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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410..1249
DNA (840bp) protein (280aa)
UPI0003D0692A related cluster n=1 Tax=unknown RepID=UPI0003D0692A
hypothetical protein
Tax=RIFCSPHIGHO2_01_FULL_Sphingopyxis_65_20_curated
SCNpilot_cont_500_bf_scaffold_23885_trna_1
unknown

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comp(1272..1344)
DNA (73bp)
transferRNA
SCNpilot_cont_500_bf_scaffold_23885_3
Devosia sp. LC5, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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1488..1931
DNA (444bp) protein (148aa)
Membrane protein n=1 Tax=Mesorhizobium sp. LSHC420B00 RepID=V7FIT8_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:KFC62712.1}; TaxID=1502724 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. LC5.;"
SCNpilot_cont_500_bf_scaffold_23885_4
Magnetococcus marinus, Magnetococcus, Magnetococcales, Alphaproteobacteria, Proteobacteria, Bacteria

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2108..3502
DNA (1395bp) protein (465aa)
TPR repeat-containing protein n=1 Tax=Magnetococcus sp. (strain MC-1) RepID=A0L9M0_MAGSM
hypothetical protein rbh
TPR repeat-containing protein {ECO:0000313|EMBL:ABK44663.1}; Flags: Precursor;; TaxID=156889 species="Bacteria; Proteobacteria; Alphaproteobacteria; Magnetococcales; Magnetococcaceae; Magnetococcus.;" source="Magnetococcus marinus (strain ATCC BAA-1437 / JCM 17883 / MC-1).;"
SCNpilot_cont_500_bf_scaffold_23885_5
Devosia riboflavina, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3541..4092)
DNA (552bp) protein (184aa)
rRNA methylase; K03218 23S rRNA (guanosine2251-2'-O)-methyltransferase [EC:2.1.1.185]
rRNA methylase n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RCU8_PELHB
RNA methyltransferase {ECO:0000313|EMBL:KFL31398.1}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
Displaying 6 items

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