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SCNpilot_cont_500_bf_scaffold_10355

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Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_500_bf_scaffold_10355_1
Rhizobium leguminosarum, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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3..188
DNA (186bp) protein (62aa)
Putative glucose-methanol-choline oxidoreductase protein n=1 Tax=Rhizobium etli (strain CIAT 652) RepID=B3PQ75_RHIE6
glucose-methanol-choline oxidoreductase
Glucose-methanol-choline oxidoreductase {ECO:0000313|EMBL:KEC71646.1}; TaxID=1408223 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium leguminosarum bv. phaseoli CCGM1.;"
SCNpilot_cont_500_bf_scaffold_10355_2
Azospirillum lipoferum, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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185..628
DNA (444bp) protein (148aa)
Uncharacterized protein n=1 Tax=Azospirillum lipoferum (strain 4B) RepID=G7ZFG8_AZOL4
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBS90274.1}; TaxID=862719 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum.;" source="Azospirillum lipoferum (strain 4B).;"
SCNpilot_cont_500_bf_scaffold_10355_3
Rhizobium sp. CF122, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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658..1293
DNA (636bp) protein (212aa)
hypothetical protein n=1 Tax=Chelatococcus sp. GW1 RepID=UPI0002F3DC36
Transcriptional regulator {ECO:0000313|EMBL:EJL51766.1}; Flags: Precursor;; TaxID=1144312 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. CF122.;"
negative transcriptional regulator; K07734 transcriptional regulator
SCNpilot_cont_500_bf_scaffold_10355_4
Devosia psychrophila, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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1357..2247
DNA (891bp) protein (297aa)
UPI0003D02F40 related cluster n=1 Tax=unknown RepID=UPI0003D02F40 rbh
Lipid kinase {ECO:0000313|EMBL:KKC34094.1}; TaxID=728005 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia psychrophila.;"
transcription regulator (contains diacylglycerol kinase catalytic domain); K07029 rbh
SCNpilot_cont_500_bf_scaffold_10355_5
unknown

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2372..2506
DNA (135bp) protein (45aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_10355_6
unknown

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comp(2514..2678)
DNA (165bp) protein (55aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_10355_7
Devosia geojensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2745..3326)
DNA (582bp) protein (194aa)
UPI0003CDF74A related cluster n=1 Tax=unknown RepID=UPI0003CDF74A
Membrane protein {ECO:0000313|EMBL:KKB10853.1}; TaxID=443610 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia geojensis.;"
putative transmembrane iron-regulated protein
SCNpilot_cont_500_bf_scaffold_10355_8
unknown

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3425..3802
DNA (378bp) protein (126aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_10355_9
Pelagibacterium halotolerans, Pelagibacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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3864..4718
DNA (855bp) protein (285aa)
Periplasmic ATP/GTP-binding protein n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RA69_PELHB
periplasmic ATP/GTP-binding protein
Periplasmic ATP/GTP-binding protein {ECO:0000313|EMBL:AEQ53552.1}; TaxID=1082931 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Pelagibacterium.;" source="Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2).;"
SCNpilot_cont_500_bf_scaffold_10355_10
Devosia epidermidihirudinis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(4910..5827)
DNA (918bp) protein (306aa)
Putative transcription regulator protein n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RA67_PELHB rbh
Uncharacterized protein {ECO:0000313|EMBL:KKC37933.1}; TaxID=1293439 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia epidermidihirudinis.;"
putative transcription regulator protein rbh
SCNpilot_cont_500_bf_scaffold_10355_11
unknown

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5925..6083
DNA (159bp) protein (53aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_10355_12
Devosia geojensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(6299..7444)
DNA (1146bp) protein (382aa)
Putative RNA methylase; K07444 putative N6-adenine-specific DNA methylase [EC:2.1.1.-] rbh
Putative RNA methylase n=1 Tax=Azospirillum lipoferum (strain 4B) RepID=G7ZFR3_AZOL4 rbh
RNA methyltransferase {ECO:0000313|EMBL:KKB13264.1}; TaxID=443610 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia geojensis.;"
SCNpilot_cont_500_bf_scaffold_10355_13
Devosia sp. DDB001, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(7513..7632)
DNA (120bp) protein (40aa)
Extensin family protein n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RA70_PELHB
Extensin-like protein {ECO:0000313|EMBL:CDP53308.1}; TaxID=1228055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. DDB001.;"
extensin
Displaying 13 items

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