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SCNpilot_cont_500_bf_scaffold_8392

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Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_500_bf_scaffold_8392_1
Mesorhizobium australicum, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(203..880)
DNA (678bp) protein (226aa)
Opacity protein n=1 Tax=Mesorhizobium australicum (strain LMG 24608 / HAMBI 3006 / WSM2073) RepID=L0KNL0_MESAW
opacity protein
Opacity protein {ECO:0000313|EMBL:AGB46245.1}; Flags: Precursor;; TaxID=754035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium australicum (strain LMG 24608 / HAMBI 3006 / WSM2073).;"
SCNpilot_cont_500_bf_scaffold_8392_2
Devosia sp. DDB001, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1003..1530)
DNA (528bp) protein (176aa)
Putative membrane protein n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RBQ9_PELHB
Putative membrane protein {ECO:0000313|EMBL:CDP53174.1}; TaxID=1228055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. DDB001.;"
SCP-like extracellular protein
SCNpilot_cont_500_bf_scaffold_8392_3
unknown

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1734..1892
DNA (159bp) protein (53aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_8392_4
Pandoraea sp. SD6-2, Pandoraea, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(1917..2564)
DNA (648bp) protein (216aa)
Glycosyl transferase, family 4; K13007 Fuc2NAc and GlcNAc transferase [EC:2.4.1.-]
Glycosyl transferase, family 4 n=1 Tax=Pandoraea sp. SD6-2 RepID=R7X0A1_9BURK
Glycosyl transferase, family 4 {ECO:0000313|EMBL:EON11765.1}; TaxID=1286093 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Pandoraea.;" source="Pandoraea sp. SD6-2.;"
SCNpilot_cont_500_bf_scaffold_8392_5
Laribacter hongkongensis, Laribacter, Neisseriales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2546..2857)
DNA (312bp) protein (104aa)
Glycosyl transferase, family 4; K13007 Fuc2NAc and GlcNAc transferase [EC:2.4.1.-]
Glycosyl transferase, family 4 n=1 Tax=Laribacter hongkongensis (strain HLHK9) RepID=C1DDD3_LARHH
Glycosyl transferase, family 4 {ECO:0000313|EMBL:ACO75765.1}; TaxID=557598 species="Bacteria; Proteobacteria; Betaproteobacteria; Neisseriales; Chromobacteriaceae; Laribacter.;" source="Laribacter hongkongensis (strain HLHK9).;"
SCNpilot_cont_500_bf_scaffold_8392_6
Mesorhizobium sp. L103C120A0, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3116..3925)
DNA (810bp) protein (270aa)
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI0003821339 rbh
3-oxoacyl-ACP reductase {ECO:0000313|EMBL:ESZ66551.1}; TaxID=1287086 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. L103C120A0.;"
short-chain dehydrogenase/reductase SDR rbh
SCNpilot_cont_500_bf_scaffold_8392_7
Mesorhizobium sp. LSHC414A00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3938..4921)
DNA (984bp) protein (328aa)
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI000381BE7C
Uncharacterized protein {ECO:0000313|EMBL:ESX79928.1}; TaxID=1287287 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LSHC414A00.;"
xylose isomerase domain-containing protein rbh
SCNpilot_cont_500_bf_scaffold_8392_8
Mesorhizobium sp. LSHC420B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4950..5663)
DNA (714bp) protein (238aa)
Short-chain dehydrogenase/reductase SDR n=1 Tax=Mesorhizobium opportunistum (strain LMG 24607 / HAMBI 3007 / WSM2075) RepID=F7YHP0_MESOW
short-chain dehydrogenase/reductase SDR
3-oxoacyl-ACP reductase {ECO:0000313|EMBL:ESX72474.1}; TaxID=1287292 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LSHC420B00.;"
SCNpilot_cont_500_bf_scaffold_8392_9
Mesorhizobium sp. LNHC221B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(5716..6822)
DNA (1107bp) protein (369aa)
sugar ABC transporter ATPase n=1 Tax=Kaistia granuli RepID=UPI000382510E rbh
Sugar ABC transporter ATPase {ECO:0000313|EMBL:ESY81332.1}; TaxID=1287233 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNHC221B00.;"
ABC transporter rbh
SCNpilot_cont_500_bf_scaffold_8392_10
Mesorhizobium sp. ORS3324, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(6823..7326)
DNA (504bp) protein (168aa)
sugar ABC transporter permease n=1 Tax=Kaistia granuli RepID=UPI000374B3A9
Uncharacterized protein {ECO:0000313|EMBL:CDX23365.1}; TaxID=1505932 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. ORS3324.;"
binding-protein-dependent transport systems inner membrane component; K02026 multiple sugar transport system permease protein
SCNpilot_cont_500_bf_scaffold_8392_11
Mesorhizobium sp. ORS3324, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7641..8561)
DNA (921bp) protein (307aa)
ABC transporter permease n=1 Tax=Kaistia granuli RepID=UPI00037AB070 rbh
Binding-protein-dependent transport systems inner membrane component {ECO:0000313|EMBL:CDX23366.1}; TaxID=1505932 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. ORS3324.;"
binding-protein-dependent transport systems inner membrane component; K02025 multiple sugar transport system permease protein rbh
SCNpilot_cont_500_bf_scaffold_8392_12
Mesorhizobium sp. LSJC280B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8642..9916)
DNA (1275bp) protein (425aa)
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI000360F39C rbh
Sugar ABC transporter substrate-binding protein {ECO:0000313|EMBL:ESW90113.1}; TaxID=1287336 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LSJC280B00.;"
family 1 extracellular solute-binding protein rbh
SCNpilot_cont_500_bf_scaffold_8392_13
Mesorhizobium sp. LSHC420B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10083..11282
DNA (1200bp) protein (400aa)
Uncharacterized protein n=1 Tax=Mesorhizobium sp. LSHC420B00 RepID=V7FFY5_9RHIZ rbh
Uncharacterized protein {ECO:0000313|EMBL:ESX72506.1}; TaxID=1287292 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LSHC420B00.;"
ROK family protein rbh
SCNpilot_cont_500_bf_scaffold_8392_14
Devosia limi, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11564..12415
DNA (852bp) protein (284aa)
hypothetical protein n=1 Tax=Caulobacter sp. JGI 0001010-J14 RepID=UPI00036ABA9C
Uncharacterized protein {ECO:0000313|EMBL:KKB76834.1}; TaxID=1121477 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia limi DSM 17137.;"
NAD-dependent epimerase/dehydratase
Displaying 14 items

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