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SCNpilot_cont_500_bf_scaffold_3836

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Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_500_bf_scaffold_3836_1
Devosia sp. DDB001, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1..378)
DNA (378bp) protein (126aa)
Uncharacterized protein n=2 Tax=Oligotropha carboxidovorans RepID=B6JF76_OLICO
Mlr7847 protein {ECO:0000313|EMBL:CDP52776.1}; TaxID=1228055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. DDB001.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_3836_2
Devosia sp. DDB001, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(430..1050)
DNA (621bp) protein (207aa)
ErfK/YbiS/YcfS/YnhG n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RAD0_PELHB
Uncharacterized protein {ECO:0000313|EMBL:CDP52777.1}; TaxID=1228055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. DDB001.;"
ErfK/YbiS/YcfS/YnhG protein
SCNpilot_cont_500_bf_scaffold_3836_3
Devosia sp. DDB001, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1261..1740)
DNA (480bp) protein (160aa)
Probable glutathione S-transferase-related transme mbrane protein {ECO:0000313|EMBL:CDP50219.1}; EC=2.5.1.18 {ECO:0000313|EMBL:CDP50219.1};; TaxID=1228055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. DDB001.;"
Uncharacterized protein n=1 Tax=Caulobacter sp. AP07 RepID=J3A7J4_9CAUL
Activator of Hsp90 ATPase 1 family protein
SCNpilot_cont_500_bf_scaffold_3836_4
Devosia limi, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1803..2237)
DNA (435bp) protein (145aa)
CheY chemotaxis protein n=1 Tax=Sulfurihydrogenibium azorense (strain Az-Fu1 / DSM 15241 / OCM 825) RepID=C1DW07_SULAA
Uncharacterized protein {ECO:0000313|EMBL:KKB86021.1}; TaxID=1121477 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia limi DSM 17137.;"
chemotaxis protein CheY; K03413 two-component system, chemotaxis family, response regulator CheY
SCNpilot_cont_500_bf_scaffold_3836_5
Devosia sp. DDB001, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2382..2984
DNA (603bp) protein (201aa)
DNA-3-methyladenine glycosylase {ECO:0000313|EMBL:CDP52778.1}; EC=3.2.2.20 {ECO:0000313|EMBL:CDP52778.1};; TaxID=1228055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. DDB001.;"
DNA-3-methyladenine glycosylase; K01246 DNA-3-methyladenine glycosylase I [EC:3.2.2.20]
DNA-3-methyladenine glycosylase I n=1 Tax=Hoeflea phototrophica DFL-43 RepID=A9D0B0_9RHIZ
SCNpilot_cont_500_bf_scaffold_3836_6
unknown

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comp(3044..3208)
DNA (165bp) protein (55aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_3836_7
unknown

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comp(3205..3345)
DNA (141bp) protein (47aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_3836_8
unknown

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comp(3455..3679)
DNA (225bp) protein (75aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_3836_9
Devosia soli, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


4441..5901
DNA (1461bp) protein (487aa)
Histidine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00127, ECO:0000256|SAAS:SAAS00043629}; EC=6.1.1.21 {ECO:0000256|HAMAP-Rule:MF_00127, ECO:0000256|SAAS:SAAS00043629};; Histidyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00127}; TaxID=361041 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia soli.;"
hisS; histidyl-tRNA synthetase (EC:6.1.1.21)
Histidine--tRNA ligase n=1 Tax=Rhizobium etli bv. mimosae str. Mim1 RepID=S5RU34_RHIET
SCNpilot_cont_500_bf_scaffold_3836_10
Devosia sp. DDB001, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5898..6983
DNA (1086bp) protein (362aa)
ATP phosphoribosyltransferase regulatory subunit {ECO:0000313|EMBL:CDP52782.1}; EC=2.4.2.17 {ECO:0000313|EMBL:CDP52782.1};; TaxID=1228055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. DDB001.;"
Putative ATP phosphoribosyltransferase regulatory subunit n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RAD6_PELHB rbh
putative ATP phosphoribosyltransferase regulatory subunit; K02502 ATP phosphoribosyltransferase regulatory subunit rbh
SCNpilot_cont_500_bf_scaffold_3836_11
Devosia sp. DDB001, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6980..7714
DNA (735bp) protein (245aa)
ATP phosphoribosyltransferase {ECO:0000256|SAAS:SAAS00046302}; EC=2.4.2.17 {ECO:0000256|SAAS:SAAS00046302};; TaxID=1228055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. DDB001.;"
ATP phosphoribosyltransferase; K00765 ATP phosphoribosyltransferase [EC:2.4.2.17]
ATP phosphoribosyltransferase catalytic subunit n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RAD7_PELHB
SCNpilot_cont_500_bf_scaffold_3836_12
Devosia sp. 17-2-E-8, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7711..8463
DNA (753bp) protein (251aa)
Putative membrane protein YfcA n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RAD9_PELHB rbh
Membrane protein {ECO:0000313|EMBL:KFL27700.1}; TaxID=1535287 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. 17-2-E-8.;"
putative membrane protein YfcA; K07090 rbh
SCNpilot_cont_500_bf_scaffold_3836_13
Mesorhizobium sp. L103C105A0, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8835..9311
DNA (477bp) protein (159aa)
hypothetical protein n=1 Tax=Rhizobium giardinii RepID=UPI0003641B77
Uncharacterized protein {ECO:0000313|EMBL:ESZ70783.1}; TaxID=1287074 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. L103C105A0.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_3836_14
unknown

Not on your lists

9370..9486
DNA (117bp) protein (39aa)

This feature has no annotations

Displaying 14 items

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