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SCNpilot_cont_500_bf_scaffold_6293

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Displaying 7 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_500_bf_scaffold_6293_1
Devosia sp. DDB001, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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217..1221
DNA (1005bp) protein (335aa)
ABC transporter, ATP-binding protein n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RB21_PELHB
ABC-type multidrug transport system, ATPase compon ent {ECO:0000313|EMBL:CDP52403.1}; TaxID=1228055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. DDB001.;"
ABC transporter ATP-binding protein; K09687 antibiotic transport system ATP-binding protein
SCNpilot_cont_500_bf_scaffold_6293_2
Devosia sp. 17-2-E-8, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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1233..1991
DNA (759bp) protein (253aa)
Putative ABC transporter transmembrane protein n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RB20_PELHB
Transport permease protein {ECO:0000256|RuleBase:RU361157}; TaxID=1535287 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. 17-2-E-8.;"
putative ABC transporter transmembrane protein; K09686 antibiotic transport system permease protein
SCNpilot_cont_500_bf_scaffold_6293_3
Rhizobium sp. CCGE 510, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1992..3212)
DNA (1221bp) protein (407aa)
Major facilitator superfamily protein n=1 Tax=Rhizobium sp. CCGE 510 RepID=J5MUH1_9RHIZ rbh
Major facilitator superfamily protein {ECO:0000313|EMBL:EJT04810.1}; TaxID=1132836 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. CCGE 510.;"
major facilitator superfamily protein rbh
SCNpilot_cont_500_bf_scaffold_6293_4
Rhizobium sp. CF142, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3209..3814)
DNA (606bp) protein (202aa)
Putative transcriptional regulator n=1 Tax=Rhizobium sp. CF142 RepID=J2ANM1_9RHIZ
Putative transcriptional regulator {ECO:0000313|EMBL:EJJ24810.1}; Flags: Precursor;; TaxID=1144314 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. CF142.;"
ArsR family transcriptional regulator
SCNpilot_cont_500_bf_scaffold_6293_5
Devosia sp. 17-2-E-8, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(4112..5476)
DNA (1365bp) protein (455aa)
glutamate--cysteine ligase; K01919 glutamate--cysteine ligase [EC:6.3.2.2] rbh
Glutamate--cysteine ligase n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RB19_PELHB rbh
Glutamate--cysteine ligase {ECO:0000313|EMBL:KFL27664.1}; TaxID=1535287 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. 17-2-E-8.;"
SCNpilot_cont_500_bf_scaffold_6293_6
Devosia geojensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(5559..6344)
DNA (786bp) protein (262aa)
Ribosomal RNA small subunit methyltransferase E {ECO:0000256|PIRNR:PIRNR015601}; EC=2.1.1.193 {ECO:0000256|PIRNR:PIRNR015601};; TaxID=443610 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia geojensis.;"
ribosomal RNA small subunit methyltransferase E; K09761 16S rRNA (uracil1498-N3)-methyltransferase [EC:2.1.1.193]
Ribosomal RNA small subunit methyltransferase E n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RB18_PELHB
SCNpilot_cont_500_bf_scaffold_6293_7
Devosia geojensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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6365..7171
DNA (807bp) protein (269aa)
4-hydroxybenzoate polyprenyltransferase; K03179 4-hydroxybenzoate octaprenyltransferase [EC:2.5.1.-]
4-hydroxybenzoate polyprenyltransferase n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RB17_PELHB
4-hydroxybenzoate polyprenyltransferase {ECO:0000313|EMBL:KKB10475.1}; TaxID=443610 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia geojensis.;"
Displaying 7 items

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