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SCNpilot_cont_500_bf_scaffold_12870_1

Organism: SCNPILOT_CONT_300_BF_Rhizobiales_66_14

partial RP 27 / 55 BSCG 28 / 51 MC: 3 ASCG 10 / 38
Location: comp(1..321)

Top 3 Functional Annotations

Value Algorithm Source
icdA; isocitrate dehydrogenase; K00031 isocitrate dehydrogenase [EC:1.1.1.42] similarity KEGG
DB: KEGG
  • Identity: 95.3
  • Coverage: 107.0
  • Bit_score: 208
  • Evalue 7.90e-52
Isocitrate dehydrogenase [NADP] {ECO:0000256|PIRNR:PIRNR000108}; EC=1.1.1.42 {ECO:0000256|PIRNR:PIRNR000108};; TaxID=176299 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium; Agrobacterium tumefaciens complex.;" source="Agrobacterium fabrum (strain C58 / ATCC 33970) (Agrobacterium; tumefaciens (strain C58)).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 95.3
  • Coverage: 107.0
  • Bit_score: 208
  • Evalue 3.50e-51
Isocitrate dehydrogenase [NADP] n=1 Tax=Rhizobium lupini HPC(L) RepID=K5C1A0_RHILU similarity UNIREF
DB: UNIREF100
  • Identity: 95.3
  • Coverage: 107.0
  • Bit_score: 208
  • Evalue 2.50e-51

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Taxonomy

Agrobacterium fabrum → Agrobacterium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 321
ATGGCCAAGATCAAAGTTGCCAACCCTGTCGTCGATCTCGACGGCGATGAGATGACCCGCATCATCTGGCAGGCGATCAAGGACAAGCTGATCCTTCCCTATCTCGATCTCGACATCGAGTATTACGACCTCTCGGTGCAGAACCGCGACGCCACCAACGACCAGGTGACGGTCGATGCCGCCAACGCCATCAAGAAGCATGGCGTCGGTATCAAATGCGCCACCATCACCCCCGACGAGCAGCGCGTCGAAGAGTTCAAGCTCAAGAAGATGTGGAAGTCGCCCAACGGCACCATCCGCAACATCCTGGGCGGCGTGATC
PROTEIN sequence
Length: 107
MAKIKVANPVVDLDGDEMTRIIWQAIKDKLILPYLDLDIEYYDLSVQNRDATNDQVTVDAANAIKKHGVGIKCATITPDEQRVEEFKLKKMWKSPNGTIRNILGGVI