ggKbase home page

SCNpilot_cont_500_bf_scaffold_12870

Search features with annotation key words

Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_500_bf_scaffold_12870_1
Agrobacterium fabrum, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1..321)
DNA (321bp) protein (107aa)
icdA; isocitrate dehydrogenase; K00031 isocitrate dehydrogenase [EC:1.1.1.42]
Isocitrate dehydrogenase [NADP] {ECO:0000256|PIRNR:PIRNR000108}; EC=1.1.1.42 {ECO:0000256|PIRNR:PIRNR000108};; TaxID=176299 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium; Agrobacterium tumefaciens complex.;" source="Agrobacterium fabrum (strain C58 / ATCC 33970) (Agrobacterium; tumefaciens (strain C58)).;"
Isocitrate dehydrogenase [NADP] n=1 Tax=Rhizobium lupini HPC(L) RepID=K5C1A0_RHILU
SCNpilot_cont_500_bf_scaffold_12870_2
Devosia sp. 17-2-E-8, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

498..890
DNA (393bp) protein (131aa)
Transcriptional regulator, MarR family protein n=1 Tax=Nitratireductor aquibiodomus RA22 RepID=I5BTS0_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:KFL28731.1}; TaxID=1535287 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. 17-2-E-8.;"
transcriptional regulator, MarR family
SCNpilot_cont_500_bf_scaffold_12870_3
Devosia insulae, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

953..2224
DNA (1272bp) protein (424aa)
3-oxoacyl-[acyl-carrier-protein] synthase 2 {ECO:0000256|PIRNR:PIRNR000447}; EC=2.3.1.179 {ECO:0000256|PIRNR:PIRNR000447};; TaxID=1116389 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia insulae DS-56.;"
3-oxoacyl-ACP synthase; K09458 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179] rbh
3-oxoacyl-[acyl-carrier-protein] synthase 2 n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RE86_PELHB rbh
SCNpilot_cont_500_bf_scaffold_12870_4
Devosia sp. DDB001, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2417..2761)
DNA (345bp) protein (115aa)
hypothetical protein n=1 Tax=Hoeflea sp. 108 RepID=UPI0003730F26
Uncharacterized protein {ECO:0000313|EMBL:CDP50411.1}; TaxID=1228055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. DDB001.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_12870_5
Devosia sp. 17-2-E-8, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2777..3106)
DNA (330bp) protein (110aa)
Uncharacterized protein n=1 Tax=Nocardia brasiliensis ATCC 700358 RepID=K0FBP8_9NOCA
Uncharacterized protein {ECO:0000313|EMBL:KFL28728.1}; TaxID=1535287 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. 17-2-E-8.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_12870_6
Devosia sp. 17-2-E-8, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3103..3549)
DNA (447bp) protein (149aa)
Uncharacterized protein n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RE83_PELHB
Uncharacterized protein {ECO:0000313|EMBL:KFL28727.1}; TaxID=1535287 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. 17-2-E-8.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_12870_7
Devosia sp. DDB001, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3629..4129
DNA (501bp) protein (167aa)
Uncharacterized protein n=2 Tax=Labrenzia RepID=U7GEQ1_9RHOB
Putative acetyltransferase {ECO:0000313|EMBL:CDP50414.1}; TaxID=1228055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. DDB001.;"
N-acetyltransferase
SCNpilot_cont_500_bf_scaffold_12870_8
Devosia sp. 17-2-E-8, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4262..4855
DNA (594bp) protein (198aa)
Putative acetyltransferase n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RE82_PELHB
Uncharacterized protein {ECO:0000313|EMBL:KFL28725.1}; TaxID=1535287 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. 17-2-E-8.;"
putative acetyltransferase
SCNpilot_cont_500_bf_scaffold_12870_9
Devosia riboflavina, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5060..6520
DNA (1461bp) protein (487aa)
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI00037D5E3D rbh
Uncharacterized protein {ECO:0000313|EMBL:KFL30900.1}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
diguanylate cyclase
SCNpilot_cont_500_bf_scaffold_12870_10
Devosia sp. DDB001, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6537..7184
DNA (648bp) protein (216aa)
tRNA (cytidine/uridine-2'-O-)-methyltransferase TrmJ {ECO:0000256|RuleBase:RU362024}; EC=2.1.1.200 {ECO:0000256|RuleBase:RU362024};; tRNA (cytidine(32)/uridine(32)-2'-O)-methyltransferase {ECO:0000256|RuleBase:RU362024}; tRNA Cm32/Um32 methyltransferase {ECO:0000256|RuleBase:RU362024}; TaxID=1228055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. DDB001.;"
tRNA:Cm32/Um32 methyltransferase; K02533 tRNA/rRNA methyltransferase [EC:2.1.1.-]
tRNA:Cm32/Um32 methyltransferase n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RE81_PELHB
SCNpilot_cont_500_bf_scaffold_12870_11
unknown

Not on your lists

7194..7307
DNA (114bp) protein (38aa)

This feature has no annotations

Displaying 11 items

View Taxonomy