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SCNpilot_cont_500_bf_scaffold_12870_10

Organism: SCNPILOT_CONT_300_BF_Rhizobiales_66_14

partial RP 27 / 55 BSCG 28 / 51 MC: 3 ASCG 10 / 38
Location: 6537..7184

Top 3 Functional Annotations

Value Algorithm Source
tRNA (cytidine/uridine-2'-O-)-methyltransferase TrmJ {ECO:0000256|RuleBase:RU362024}; EC=2.1.1.200 {ECO:0000256|RuleBase:RU362024};; tRNA (cytidine(32)/uridine(32)-2'-O)-methyltransferase {ECO:0000256|RuleBase:RU362024}; tRNA Cm32/Um32 methyltransferase {ECO:0000256|RuleBase:RU362024}; TaxID=1228055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. DDB001.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 77.7
  • Coverage: 215.0
  • Bit_score: 343
  • Evalue 2.40e-91
tRNA:Cm32/Um32 methyltransferase; K02533 tRNA/rRNA methyltransferase [EC:2.1.1.-] similarity KEGG
DB: KEGG
  • Identity: 68.1
  • Coverage: 213.0
  • Bit_score: 290
  • Evalue 3.20e-76
tRNA:Cm32/Um32 methyltransferase n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RE81_PELHB similarity UNIREF
DB: UNIREF100
  • Identity: 68.1
  • Coverage: 213.0
  • Bit_score: 290
  • Evalue 1.00e-75

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Taxonomy

Devosia sp. DDB001 → Devosia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 648
ATGGCCGGAACCGACAAATCGCAGGAATTCATATTCCGGCCAAGCCCGGCGATCATCCTGTGCGAACCGCAACTGGGTGAGAATATCGGTACGGCGGCGCGGGCGATGGCCAATTTCGGGCTGTGGGACCTGCGGATCGTCAACCCGCGCGACCCTTGGCCGAACGAGCGAGCAATCGCCGCGGCATCGCGGGCCGACCACGTGATCGACAAGGTGCGGGTGTTCGCGACGGTCGAAGAGGCTATTGCCGACCTGCAACTGGTCTTCGCGACCACCGCCCGTCGCCGCGACATGCAGAAGCCGGTCTACGGCCCCGAGGAAGGGGCGCAGCGCATGATTTCGCACATCTCGGGCGGGGAGAAAGCCGGGCTGCTGTTCGGGCGCGAGAAGTGGGGCCTCTACAACGAGGAGGTGGCGCTCGCCGACGCCATCGTGACGTTCCCGGTCGAGGCGGCGTTCGCCTCACTCAATATCGCCCAGGCGGTGCTGCTAATGGCCTATGAGTGGCGCCAGCAGGCGGACAAGGGCGAGGTCCTGCCGTTCAGCGGCGGGCTCGATCCGACGGCGCCGCGCGAGGAACTGATCGGTTTGTTCCTGCATCTCGAACAGACGCTGGATCGCACCGGCTTCTTCAAGACGGACGACTAG
PROTEIN sequence
Length: 216
MAGTDKSQEFIFRPSPAIILCEPQLGENIGTAARAMANFGLWDLRIVNPRDPWPNERAIAAASRADHVIDKVRVFATVEEAIADLQLVFATTARRRDMQKPVYGPEEGAQRMISHISGGEKAGLLFGREKWGLYNEEVALADAIVTFPVEAAFASLNIAQAVLLMAYEWRQQADKGEVLPFSGGLDPTAPREELIGLFLHLEQTLDRTGFFKTDD*