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SCNPILOT_CONT_300_BF_Rhizobiales_66_14

SCNPILOT_CONT_500_BF_Devosia_66_5
In projects: SCNPILOT_CONT_500_BF

Consensus taxonomy: Devosia  →  Rhizobiales  →  Alphaproteobacteria  →  Proteobacteria  →  Bacteria

Metagenomic Context

Parent: SCNpilot_cont_500_bf_UNK

Properties

Avg. coverage: 4.79 Longest contig: 18.51 Kbp Bin length: 3.57 Mbp GC content: 65.87 %
Contigs count: 1097 Features count: 4450 rRNAs count: 0 tRNAs count: 19

Genome completeness

partial RP 27 / 55 BSCG 28 / 51 MC: 3 ASCG 10 / 38
Displaying items 901-950 of 1097 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
SCNpilot_cont_500_bf_scaffold_50390
Species: Devosia sp. DDB001 (50%)
2 1298 bp 68.03 4.82 76.27
SCNpilot_cont_500_bf_scaffold_59496
Species: Devosia soli (50%)
2 1130 bp 64.07 3.98 97.70
SCNpilot_cont_500_bf_scaffold_53356
Species: Devosia psychrophila (50%)
2 1240 bp 63.79 2.62 99.92
SCNpilot_cont_500_bf_scaffold_56940
Species: uncultured organism (50%)
2 1174 bp 67.38 3.83 98.89
SCNpilot_cont_500_bf_scaffold_66292
Species: Devosia riboflavina (50%)
2 1017 bp 65.49 4.67 100.30
SCNpilot_cont_500_bf_scaffold_44300
Species: Devosia epidermidihirudinis (50%)
2 1442 bp 64.91 5.20 99.65
SCNpilot_cont_500_bf_scaffold_39435
Species: Rhizobium nepotum (50%)
2 1583 bp 65.26 3.32 97.79
SCNpilot_cont_500_bf_scaffold_60819
Species: Devosia geojensis (100%)
2 1107 bp 64.05 4.74 100.00
SCNpilot_cont_500_bf_scaffold_28404
Species: Devosia sp. 17-2-E-8 (50%)
2 2052 bp 56.73 3.90 100.00
SCNpilot_cont_500_bf_scaffold_46072
Species: Nitratireductor aquibiodomus (50%)
2 1396 bp 63.83 4.66 99.28
SCNpilot_cont_500_bf_scaffold_45264
Species: Devosia chinhatensis (50%)
2 1416 bp 65.68 3.88 92.58
SCNpilot_cont_500_bf_scaffold_36622
Species: Devosia limi (50%)
2 1680 bp 67.86 4.61 89.29
SCNpilot_cont_500_bf_scaffold_28663
Species: Devosia chinhatensis (50%)
2 2037 bp 67.50 4.54 98.53
SCNpilot_cont_500_bf_scaffold_35776
Species: Devosia sp. DDB001 (50%)
2 1711 bp 62.95 3.95 98.01
SCNpilot_cont_500_bf_scaffold_40073
Species: Pelagibacterium halotolerans (100%)
2 1563 bp 68.07 4.32 90.79
SCNpilot_cont_500_bf_scaffold_52037
Species: Devosia sp. DDB001 (50%)
2 1265 bp 65.93 4.55 84.90
SCNpilot_cont_500_bf_scaffold_36114
Species: Devosia psychrophila (50%)
2 1699 bp 64.98 4.71 98.53
SCNpilot_cont_500_bf_scaffold_52551
Species: Agrobacterium fabrum (50%)
2 1255 bp 67.57 5.38 52.35
SCNpilot_cont_500_bf_scaffold_30902
Species: Devosia sp. 17-2-E-8 (50%)
2 1918 bp 65.80 4.82 99.95
SCNpilot_cont_500_bf_scaffold_58130
Species: Methylobacterium populi (50%)
2 1153 bp 56.55 3.25 88.46
SCNpilot_cont_500_bf_scaffold_59003
Species: Devosia psychrophila (50%)
2 1138 bp 63.97 4.83 93.85
SCNpilot_cont_500_bf_scaffold_29257
Species: Devosia insulae (50%)
2 2007 bp 63.78 3.24 72.94
SCNpilot_cont_500_bf_scaffold_33187
Species: Polymorphum gilvum (50%)
2 1817 bp 67.53 4.13 95.43
SCNpilot_cont_500_bf_scaffold_42220
Species: Devosia sp. DDB001 (50%)
2 1498 bp 66.82 3.67 90.12
SCNpilot_cont_500_bf_scaffold_29005
Species: Devosia geojensis (50%)
2 2019 bp 67.11 5.32 97.77
SCNpilot_cont_500_bf_scaffold_31516
Species: Devosia epidermidihirudinis (100%)
2 1890 bp 64.18 3.70 96.98
SCNpilot_cont_500_bf_scaffold_58912
Species: Devosia sp. DDB001 (50%)
2 1140 bp 68.51 2.85 87.63
SCNpilot_cont_500_bf_scaffold_56201
Species: Devosia geojensis (50%)
2 1187 bp 65.21 4.63 78.60
SCNpilot_cont_500_bf_scaffold_27237
Species: Devosia sp. LC5 (50%)
2 2120 bp 65.00 4.95 98.21
SCNpilot_cont_500_bf_scaffold_63985
Species: Devosia sp. 17-2-E-8 (50%)
2 1054 bp 68.98 4.51 93.64
SCNpilot_cont_500_bf_scaffold_92870
Species: Devosia limi (50%)
2 1252 bp 66.45 3.59 99.92
SCNpilot_cont_500_bf_scaffold_59275
Species: Ensifer adhaerens (50%)
2 1134 bp 67.64 5.73 99.74
SCNpilot_cont_500_bf_scaffold_29783
Species: Devosia insulae (50%)
2 1978 bp 65.12 5.56 96.01
SCNpilot_cont_500_bf_scaffold_55123
Species: Devosia limi (50%)
2 1208 bp 65.73 4.97 92.38
SCNpilot_cont_500_bf_scaffold_24865
Species: Devosia psychrophila (50%)
2 2273 bp 68.54 4.07 91.99
SCNpilot_cont_500_bf_scaffold_57813
Species: Devosia sp. DDB001 (50%)
2 1159 bp 59.10 3.45 83.09
SCNpilot_cont_500_bf_scaffold_44334
Species: Rhizobium leguminosarum (50%)
2 1441 bp 65.86 3.12 99.51
SCNpilot_cont_500_bf_scaffold_23379
Species: Devosia soli (100%)
2 2381 bp 65.77 4.72 66.02
SCNpilot_cont_500_bf_scaffold_56208
Species: Rhizobium freirei (50%)
2 1187 bp 66.64 4.63 100.84
SCNpilot_cont_500_bf_scaffold_29277
Species: Devosia sp. 17-2-E-8 (100%)
2 2006 bp 61.86 3.36 100.20
SCNpilot_cont_500_bf_scaffold_23126
Species: Devosia insulae (50%)
2 2401 bp 65.18 5.52 96.96
SCNpilot_cont_500_bf_scaffold_45810
Species: Devosia limi (50%)
2 1402 bp 66.55 3.57 99.07
SCNpilot_cont_500_bf_scaffold_27503
Species: R_Alphaproteobacteria_63_12 (50%)
2 2104 bp 66.25 5.35 87.69
SCNpilot_cont_500_bf_scaffold_42498
Species: Mesorhizobium sp. LSHC414A00 (50%)
2 1490 bp 57.52 3.36 98.66
SCNpilot_cont_500_bf_scaffold_33467
Species: Hyphomicrobium sp. MC1 (50%)
2 1804 bp 66.30 4.43 89.47
SCNpilot_cont_500_bf_scaffold_37604
Species: Devosia sp. DDB001 (100%)
2 1644 bp 63.50 4.56 89.42
SCNpilot_cont_500_bf_scaffold_40108
Species: Devosia sp. LC5 (50%)
2 1562 bp 68.44 3.04 76.25
SCNpilot_cont_500_bf_scaffold_15397
Species: Devosia insulae (50%)
2 3245 bp 65.08 4.85 88.84
SCNpilot_cont_500_bf_scaffold_34207
Species: Devosia sp. DDB001 (50%)
2 1776 bp 68.24 5.49 100.17
SCNpilot_cont_500_bf_scaffold_38848
Species: Bradyrhizobium sp. YR681 (50%)
2 1601 bp 60.65 3.59 75.33
Displaying items 901-950 of 1097 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.