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SCNPILOT_CONT_300_BF_Rhizobiales_66_14

SCNPILOT_CONT_500_BF_Devosia_66_5
In projects: SCNPILOT_CONT_500_BF

Consensus taxonomy: Devosia  →  Rhizobiales  →  Alphaproteobacteria  →  Proteobacteria  →  Bacteria

Metagenomic Context

Parent: SCNpilot_cont_500_bf_UNK

Properties

Avg. coverage: 4.79 Longest contig: 18.51 Kbp Bin length: 3.57 Mbp GC content: 65.87 %
Contigs count: 1097 Features count: 4450 rRNAs count: 0 tRNAs count: 19

Genome completeness

partial RP 27 / 55 BSCG 28 / 51 MC: 3 ASCG 10 / 38
Displaying items 951-1000 of 1097 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
SCNpilot_cont_500_bf_scaffold_27768
Species: Devosia sp. LC5 (50%)
2 2089 bp 66.78 5.27 94.35
SCNpilot_cont_500_bf_scaffold_41090
Species: Mesorhizobium sp. STM 4661 (50%)
2 1533 bp 68.88 4.08 90.61
SCNpilot_cont_500_bf_scaffold_65303
Species: Devosia riboflavina (50%)
2 1032 bp 65.70 3.39 89.24
SCNpilot_cont_500_bf_scaffold_30172
Species: Devosia sp. 17-2-E-8 (50%)
2 1957 bp 65.92 5.37 92.28
SCNpilot_cont_500_bf_scaffold_50448
Species: Devosia psychrophila (50%)
2 1297 bp 68.54 4.43 95.99
SCNpilot_cont_500_bf_scaffold_22366
Species: Devosia sp. 17-2-E-8 (50%)
2 3044 bp 65.11 4.85 91.85
SCNpilot_cont_500_bf_scaffold_39486
Species: Devosia epidermidihirudinis (50%)
2 1581 bp 64.90 4.59 93.55
SCNpilot_cont_500_bf_scaffold_39231
Species: Devosia soli (50%)
2 1589 bp 63.56 3.93 61.36
SCNpilot_cont_500_bf_scaffold_48075
Species: Devosia riboflavina (50%)
2 1347 bp 66.00 4.27 99.78
SCNpilot_cont_500_bf_scaffold_46123 2 1395 bp 67.46 4.66 99.78
SCNpilot_cont_500_bf_scaffold_35568
Species: Devosia psychrophila (50%)
2 1720 bp 68.66 5.23 98.20
SCNpilot_cont_500_bf_scaffold_43321
Species: Devosia soli (50%)
2 1467 bp 59.99 3.75 48.88
SCNpilot_cont_500_bf_scaffold_46125
Species: Devosia limi (50%)
2 1395 bp 64.30 3.58 80.00
SCNpilot_cont_500_bf_scaffold_46382
Species: Devosia sp. DDB001 (50%)
2 1389 bp 64.43 3.96 90.50
SCNpilot_cont_500_bf_scaffold_38860
Species: Mesorhizobium sp. L48C026A00 (50%)
2 1600 bp 58.94 3.44 73.88
SCNpilot_cont_500_bf_scaffold_32908
Species: Devosia limi (100%)
2 1829 bp 66.59 4.37 97.27
SCNpilot_cont_500_bf_scaffold_65826
Species: Rhizobium leguminosarum (100%)
2 1025 bp 64.20 2.93 100.10
SCNpilot_cont_500_bf_scaffold_43071
Species: Devosia sp. DDB001 (50%)
2 1474 bp 65.60 5.43 99.12
SCNpilot_cont_500_bf_scaffold_43584
Species: Devosia sp. LC5 (50%)
2 1461 bp 67.62 3.25 94.87
SCNpilot_cont_500_bf_scaffold_42008
Species: Devosia insulae (50%)
2 1504 bp 66.22 4.99 89.36
SCNpilot_cont_500_bf_scaffold_59822
Species: Devosia limi (50%)
2 1124 bp 67.79 5.12 82.47
SCNpilot_cont_500_bf_scaffold_30442
Species: Rhizobium leguminosarum (50%)
2 1943 bp 62.33 4.37 99.59
SCNpilot_cont_500_bf_scaffold_43330
Species: Devosia sp. 17-2-E-8 (50%)
2 1467 bp 66.26 4.09 84.25
SCNpilot_cont_500_bf_scaffold_38866
Species: Mesorhizobium alhagi (50%)
2 1600 bp 65.19 3.28 89.63
SCNpilot_cont_500_bf_scaffold_58182
Species: Agrobacterium arsenijevicii (50%)
2 1153 bp 65.13 5.20 88.20
SCNpilot_cont_500_bf_scaffold_28724
Species: Mesorhizobium sp. LNHC232B00 (50%)
2 2035 bp 60.54 2.83 96.56
SCNpilot_cont_500_bf_scaffold_54912
Species: Devosia limi (50%)
2 1212 bp 63.86 3.30 86.63
SCNpilot_cont_500_bf_scaffold_53940
Species: Devosia limi (50%)
2 1229 bp 64.44 3.25 99.84
SCNpilot_cont_500_bf_scaffold_50726
Species: Devosia riboflavina (50%)
2 1290 bp 64.50 4.26 78.37
SCNpilot_cont_500_bf_scaffold_33756
Species: Chelativorans sp. BNC1 (50%)
2 1794 bp 67.95 3.34 100.00
SCNpilot_cont_500_bf_scaffold_26101
Species: Sinorhizobium meliloti (50%)
2 2191 bp 63.81 3.88 84.21
SCNpilot_cont_500_bf_scaffold_44122
Species: Devosia limi (50%)
2 1447 bp 67.45 5.87 103.04
SCNpilot_cont_500_bf_scaffold_62740
Species: Devosia sp. DDB001 (50%)
2 1075 bp 62.14 5.58 75.91
SCNpilot_cont_500_bf_scaffold_12865
Species: Devosia geojensis (50%)
2 3700 bp 66.62 4.32 91.22
SCNpilot_cont_500_bf_scaffold_36954
Species: Devosia riboflavina (100%)
2 1668 bp 68.47 5.55 85.61
SCNpilot_cont_500_bf_scaffold_21962
Species: Devosia geojensis (50%)
2 2499 bp 67.87 5.10 90.76
SCNpilot_cont_500_bf_scaffold_57095
Species: Devosia limi (50%)
2 1172 bp 66.89 4.69 90.87
SCNpilot_cont_500_bf_scaffold_39259
Species: Devosia sp. 17-2-E-8 (50%)
2 1588 bp 72.10 3.46 100.13
SCNpilot_cont_500_bf_scaffold_63527
Species: Devosia sp. LC5 (50%)
2 1061 bp 63.90 4.71 94.44
SCNpilot_cont_500_bf_scaffold_26108
Species: Devosia epidermidihirudinis (50%)
2 2191 bp 67.59 4.34 100.23
SCNpilot_cont_500_bf_scaffold_24661
Species: Devosia geojensis (50%)
2 2287 bp 66.68 4.81 98.38
SCNpilot_cont_500_bf_scaffold_35341
Species: Devosia psychrophila (100%)
2 1729 bp 64.55 2.75 93.52
SCNpilot_cont_500_bf_scaffold_42541
Species: Devosia sp. LC5 (50%)
2 1489 bp 67.43 4.37 67.29
SCNpilot_cont_500_bf_scaffold_27805
Species: Devosia sp. DDB001 (50%)
2 2087 bp 66.84 4.79 91.28
SCNpilot_cont_500_bf_scaffold_62234
Species: Devosia sp. 17-2-E-8 (50%)
2 1083 bp 65.65 3.00 92.52
SCNpilot_cont_500_bf_scaffold_58459
Species: Devosia insulae (50%)
2 1148 bp 67.51 4.79 84.41
SCNpilot_cont_500_bf_scaffold_61284
Species: Mesorhizobium ciceri (50%)
2 1099 bp 64.42 2.96 99.91
SCNpilot_cont_500_bf_scaffold_39265
Species: Chelativorans sp. BNC1 (50%)
2 1588 bp 62.41 4.25 99.37
SCNpilot_cont_500_bf_scaffold_53702
Species: Devosia sp. DDB001 (50%)
2 1234 bp 64.59 4.46 80.23
SCNpilot_cont_500_bf_scaffold_19570
Species: Devosia chinhatensis (50%)
2 2717 bp 65.77 4.32 99.82
Displaying items 951-1000 of 1097 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.