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SCNpilot_cont_500_bf_scaffold_4617

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Displaying 8 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_500_bf_scaffold_4617_1
Fimbriimonas ginsengisoli, Fimbriimonas, Fimbriimonadales, Fimbriimonadia, Armatimonadetes, Bacteria

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comp(1..504)
DNA (504bp) protein (168aa)
Transcriptional regulator, LacI family n=5 Tax=Bacteroides RepID=A7UXU2_BACUN
Transcriptional regulator, LacI family {ECO:0000313|EMBL:AIE84555.1}; TaxID=661478 species="Bacteria; Armatimonadetes; Fimbriimonadia; Fimbriimonadales; Fimbriimonadaceae; Fimbriimonas.;" source="Fimbriimonas ginsengisoli Gsoil 348.;"
LacI family transcriptional regulator
SCNpilot_cont_500_bf_scaffold_4617_2
Fimbriimonas ginsengisoli, Fimbriimonas, Fimbriimonadales, Fimbriimonadia, Armatimonadetes, Bacteria

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comp(553..2250)
DNA (1698bp) protein (566aa)
Polysaccharide deacetylase n=1 Tax=Gloeobacter kilaueensis JS1 RepID=U5QE92_9CYAN rbh
Polysaccharide deacetylase family protein {ECO:0000313|EMBL:AIE85675.1}; TaxID=661478 species="Bacteria; Armatimonadetes; Fimbriimonadia; Fimbriimonadales; Fimbriimonadaceae; Fimbriimonas.;" source="Fimbriimonas ginsengisoli Gsoil 348.;"
pgaB; polysaccharide deacetylase rbh
SCNpilot_cont_500_bf_scaffold_4617_3
Fimbriimonas ginsengisoli, Fimbriimonas, Fimbriimonadales, Fimbriimonadia, Armatimonadetes, Bacteria

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2418..4496
DNA (2079bp) protein (693aa)
Rad3-related DNA helicases (EC:3.6.4.12)
Rad3-related DNA helicases n=1 Tax=Chthonomonas calidirosea T49 RepID=S0EZ75_9BACT
DinG family ATP-dependent helicase YoaA {ECO:0000313|EMBL:AIE85236.1}; TaxID=661478 species="Bacteria; Armatimonadetes; Fimbriimonadia; Fimbriimonadales; Fimbriimonadaceae; Fimbriimonas.;" source="Fimbriimonas ginsengisoli Gsoil 348.;"
SCNpilot_cont_500_bf_scaffold_4617_4
Fimbriimonas ginsengisoli, Fimbriimonas, Fimbriimonadales, Fimbriimonadia, Armatimonadetes, Bacteria

Not on your lists

comp(4499..4762)
DNA (264bp) protein (88aa)
membrane protein n=1 Tax=Enterovibrio calviensis RepID=UPI00030606F6
Transglycosylase-associated protein {ECO:0000313|EMBL:AIE85237.1}; TaxID=661478 species="Bacteria; Armatimonadetes; Fimbriimonadia; Fimbriimonadales; Fimbriimonadaceae; Fimbriimonas.;" source="Fimbriimonas ginsengisoli Gsoil 348.;"
SCNpilot_cont_500_bf_scaffold_4617_5
Fimbriimonas ginsengisoli, Fimbriimonas, Fimbriimonadales, Fimbriimonadia, Armatimonadetes, Bacteria

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4798..5817
DNA (1020bp) protein (340aa)
Homoserine kinase n=1 Tax=uncultured bacterium A1Q1_fos_485 RepID=L7W2D4_9BACT
Aminoglycoside phosphotransferase {ECO:0000313|EMBL:AIE85238.1}; TaxID=661478 species="Bacteria; Armatimonadetes; Fimbriimonadia; Fimbriimonadales; Fimbriimonadaceae; Fimbriimonas.;" source="Fimbriimonas ginsengisoli Gsoil 348.;"
aminoglycoside phosphotransferase
SCNpilot_cont_500_bf_scaffold_4617_6
RBG_16_Armatimonadetes_58_9_curated, Armatimonadetes, Bacteria

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5849..7303
DNA (1455bp) protein (485aa)
RNA polymerase, sigma 54 subunit, RpoN/SigL n=1 Tax=Chthonomonas calidirosea T49 RepID=S0EU72_9BACT
RNA polymerase, sigma 54 subunit, RpoN/SigL
Tax=RBG_16_Armatimonadetes_58_9_curated
SCNpilot_cont_500_bf_scaffold_4617_7
unknown

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7344..7934
DNA (591bp) protein (197aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_4617_8
Fimbriimonas ginsengisoli, Fimbriimonas, Fimbriimonadales, Fimbriimonadia, Armatimonadetes, Bacteria

Not on your lists

7931..8167
DNA (237bp) protein (79aa)
hypothetical protein n=1 Tax=Aminicenantes bacterium SCGC AAA252-N07 RepID=UPI00037F668D
Peptidase M55, D-aminopeptidase {ECO:0000313|EMBL:AIE85010.1}; TaxID=661478 species="Bacteria; Armatimonadetes; Fimbriimonadia; Fimbriimonadales; Fimbriimonadaceae; Fimbriimonas.;" source="Fimbriimonas ginsengisoli Gsoil 348.;"
peptidase M55 D-aminopeptidase; K02035 peptide/nickel transport system substrate-binding protein
Displaying 8 items

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