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SCNpilot_cont_500_bf_scaffold_5019

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Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_500_bf_scaffold_5019_1
Deinococcus swuensis, Deinococcus, Deinococcales, Deinococci, Deinococcus-Thermus, Bacteria

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comp(4..978)
DNA (975bp) protein (325aa)
glycosidase (EC:3.2.1.-)
Glycosidase n=1 Tax=Anaerolinea thermophila (strain DSM 14523 / JCM 11388 / NBRC 100420 / UNI-1) RepID=E8N413_ANATU
Glycoside hydrolase {ECO:0000313|EMBL:AIZ45975.1}; TaxID=1182571 species="Bacteria; Deinococcus-Thermus; Deinococci; Deinococcales; Deinococcaceae; Deinococcus.;" source="Deinococcus swuensis.;"
SCNpilot_cont_500_bf_scaffold_5019_2
Fimbriimonas ginsengisoli, Fimbriimonas, Fimbriimonadales, Fimbriimonadia, Armatimonadetes, Bacteria

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comp(983..1486)
DNA (504bp) protein (168aa)
N-Acetyl-D-glucosamine ABC transport system,permease protein 2 n=1 Tax=Caloramator australicus RC3 RepID=I7KSQ9_9CLOT
N-Acetyl-D-glucosamine ABC transport system, permease protein 2 {ECO:0000313|EMBL:AIE85574.1}; TaxID=661478 species="Bacteria; Armatimonadetes; Fimbriimonadia; Fimbriimonadales; Fimbriimonadaceae; Fimbriimonas.;" source="Fimbriimonas ginsengisoli Gsoil 348.;"
binding-protein-dependent transport system inner membrane protein; K02026 multiple sugar transport system permease protein
SCNpilot_cont_500_bf_scaffold_5019_3
Fimbriimonas ginsengisoli, Fimbriimonas, Fimbriimonadales, Fimbriimonadia, Armatimonadetes, Bacteria

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comp(1512..1730)
DNA (219bp) protein (73aa)
N-Acetyl-D-glucosamine ABC transport system, permease protein 2 {ECO:0000313|EMBL:AIE85574.1}; TaxID=661478 species="Bacteria; Armatimonadetes; Fimbriimonadia; Fimbriimonadales; Fimbriimonadaceae; Fimbriimonas.;" source="Fimbriimonas ginsengisoli Gsoil 348.;"
SCNpilot_cont_500_bf_scaffold_5019_4
Fimbriimonas ginsengisoli, Fimbriimonas, Fimbriimonadales, Fimbriimonadia, Armatimonadetes, Bacteria

Not on your lists

comp(1982..2872)
DNA (891bp) protein (297aa)
hypothetical protein n=1 Tax=unclassified candidate division EM 19 RepID=UPI0003680C47
Uncharacterized protein {ECO:0000313|EMBL:AIE85576.1}; TaxID=661478 species="Bacteria; Armatimonadetes; Fimbriimonadia; Fimbriimonadales; Fimbriimonadaceae; Fimbriimonas.;" source="Fimbriimonas ginsengisoli Gsoil 348.;"
prepilin-type N-terminal cleavage/methylation domain
SCNpilot_cont_500_bf_scaffold_5019_5
Fimbriimonas ginsengisoli, Fimbriimonas, Fimbriimonadales, Fimbriimonadia, Armatimonadetes, Bacteria

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comp(2916..3926)
DNA (1011bp) protein (337aa)
Predicted transcriptional regulator n=1 Tax=Chthonomonas calidirosea T49 RepID=S0ETR4_9BACT rbh
Regulatory protein ArsR {ECO:0000313|EMBL:AIE85577.1}; TaxID=661478 species="Bacteria; Armatimonadetes; Fimbriimonadia; Fimbriimonadales; Fimbriimonadaceae; Fimbriimonas.;" source="Fimbriimonas ginsengisoli Gsoil 348.;"
Predicted transcriptional regulator rbh
SCNpilot_cont_500_bf_scaffold_5019_6
Fimbriimonas ginsengisoli, Fimbriimonas, Fimbriimonadales, Fimbriimonadia, Armatimonadetes, Bacteria

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4013..4993
DNA (981bp) protein (327aa)
Putative beta-xylosidase n=1 Tax=Deinococcus peraridilitoris (strain DSM 19664 / LMG 22246 / CIP 109416 / KR-200) RepID=L0A0D1_DEIPD rbh
Glycoside hydrolase family 43 protein {ECO:0000313|EMBL:AIE84275.1}; TaxID=661478 species="Bacteria; Armatimonadetes; Fimbriimonadia; Fimbriimonadales; Fimbriimonadaceae; Fimbriimonas.;" source="Fimbriimonas ginsengisoli Gsoil 348.;"
beta-xylosidase rbh
SCNpilot_cont_500_bf_scaffold_5019_7
Fimbriimonas ginsengisoli, Fimbriimonas, Fimbriimonadales, Fimbriimonadia, Armatimonadetes, Bacteria

Not on your lists

5007..6251
DNA (1245bp) protein (415aa)
ABC transporter, sugar binding protein n=1 Tax=Caloramator australicus RC3 RepID=I7LFP9_9CLOT
ABC transporter, sugar binding protein {ECO:0000313|EMBL:AIE85578.1}; TaxID=661478 species="Bacteria; Armatimonadetes; Fimbriimonadia; Fimbriimonadales; Fimbriimonadaceae; Fimbriimonas.;" source="Fimbriimonas ginsengisoli Gsoil 348.;"
ABC-type sugar transport system, periplasmic component
SCNpilot_cont_500_bf_scaffold_5019_8
Fimbriimonas ginsengisoli, Fimbriimonas, Fimbriimonadales, Fimbriimonadia, Armatimonadetes, Bacteria

Not on your lists

6248..7108
DNA (861bp) protein (287aa)
Putative ABC transporter permease protein n=1 Tax=Caldilinea aerophila (strain DSM 14535 / JCM 11387 / NBRC 104270 / STL-6-O1) RepID=I0I6G8_CALAS
Sugar ABC transporter, permease protein {ECO:0000313|EMBL:AIE85579.1}; TaxID=661478 species="Bacteria; Armatimonadetes; Fimbriimonadia; Fimbriimonadales; Fimbriimonadaceae; Fimbriimonas.;" source="Fimbriimonas ginsengisoli Gsoil 348.;"
ABC transporter permease; K02025 multiple sugar transport system permease protein
SCNpilot_cont_500_bf_scaffold_5019_trna_1
unknown

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comp(7114..7195)
DNA (82bp)
transferRNA
SCNpilot_cont_500_bf_scaffold_5019_9
Fimbriimonas ginsengisoli, Fimbriimonas, Fimbriimonadales, Fimbriimonadia, Armatimonadetes, Bacteria

Not on your lists

comp(7216..8199)
DNA (984bp) protein (328aa)
Uncharacterized protein {ECO:0000313|EMBL:AIE87366.1}; TaxID=661478 species="Bacteria; Armatimonadetes; Fimbriimonadia; Fimbriimonadales; Fimbriimonadaceae; Fimbriimonas.;" source="Fimbriimonas ginsengisoli Gsoil 348.;"
SCNpilot_cont_500_bf_scaffold_5019_10
Fimbriimonas ginsengisoli, Fimbriimonas, Fimbriimonadales, Fimbriimonadia, Armatimonadetes, Bacteria

Not on your lists

comp(8250..8831)
DNA (582bp) protein (194aa)
Uncharacterized protein {ECO:0000313|EMBL:AIE87558.1}; TaxID=661478 species="Bacteria; Armatimonadetes; Fimbriimonadia; Fimbriimonadales; Fimbriimonadaceae; Fimbriimonas.;" source="Fimbriimonas ginsengisoli Gsoil 348.;"
SCNpilot_cont_500_bf_scaffold_5019_11
unknown

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8866..9177
DNA (312bp) protein (104aa)

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Displaying 12 items

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