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SCNpilot_cont_500_bf_scaffold_16255

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Displaying 7 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_500_bf_scaffold_16255_1
Fimbriimonas ginsengisoli, Fimbriimonas, Fimbriimonadales, Fimbriimonadia, Armatimonadetes, Bacteria

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comp(1..756)
DNA (756bp) protein (252aa)
DNA ligase {ECO:0000256|HAMAP-Rule:MF_01588, ECO:0000256|RuleBase:RU000618}; EC=6.5.1.2 {ECO:0000256|HAMAP-Rule:MF_01588, ECO:0000256|RuleBase:RU000618};; Polydeoxyribonucleotide synthase [NAD(+)] {ECO:0000256|HAMAP-Rule:MF_01588}; TaxID=661478 species="Bacteria; Armatimonadetes; Fimbriimonadia; Fimbriimonadales; Fimbriimonadaceae; Fimbriimonas.;" source="Fimbriimonas ginsengisoli Gsoil 348.;"
lig; NAD-dependent DNA ligase (EC:6.5.1.2); K01972 DNA ligase (NAD+) [EC:6.5.1.2]
DNA ligase n=1 Tax=Herbaspirillum sp. GW103 RepID=I3CUR0_9BURK
SCNpilot_cont_500_bf_scaffold_16255_2
Fimbriimonas ginsengisoli, Fimbriimonas, Fimbriimonadales, Fimbriimonadia, Armatimonadetes, Bacteria

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comp(780..1286)
DNA (507bp) protein (169aa)
UvrB/UvrC protein {ECO:0000313|EMBL:AIE87977.1}; TaxID=661478 species="Bacteria; Armatimonadetes; Fimbriimonadia; Fimbriimonadales; Fimbriimonadaceae; Fimbriimonas.;" source="Fimbriimonas ginsengisoli Gsoil 348.;"
Uncharacterized protein id=4653717 bin=GWA2_Ignavibacteria-rel_35_8 species=Ignavibacterium album genus=Ignavibacterium taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWA2_Ignavibacteria-rel_35_8 organism_group=Ignavibacteria
hypothetical protein; K08999 hypothetical protein
SCNpilot_cont_500_bf_scaffold_16255_3
Fimbriimonas ginsengisoli, Fimbriimonas, Fimbriimonadales, Fimbriimonadia, Armatimonadetes, Bacteria

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comp(1379..2770)
DNA (1392bp) protein (464aa)
Transcription termination factor Rho {ECO:0000256|HAMAP-Rule:MF_01884}; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_01884};; ATP-dependent helicase Rho {ECO:0000256|HAMAP-Rule:MF_01884}; TaxID=661478 species="Bacteria; Armatimonadetes; Fimbriimonadia; Fimbriimonadales; Fimbriimonadaceae; Fimbriimonas.;" source="Fimbriimonas ginsengisoli Gsoil 348.;"
Transcription termination factor Rho n=1 Tax=Chthonomonas calidirosea T49 RepID=S0ET73_9BACT
transcription termination factor Rho
SCNpilot_cont_500_bf_scaffold_16255_4
Fimbriimonas ginsengisoli, Fimbriimonas, Fimbriimonadales, Fimbriimonadia, Armatimonadetes, Bacteria

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comp(2833..3078)
DNA (246bp) protein (82aa)
hypoxanthine phosphoribosyltransferase (EC:2.4.2.8); K00760 hypoxanthine phosphoribosyltransferase [EC:2.4.2.8]; K04075 tRNA(Ile)-lysidine synthase [EC:6.3.4.19]
hypoxanthine phosphoribosyltransferase n=1 Tax=Lachnospiraceae bacterium NK4A136 RepID=UPI0003B41CDA
Hypoxanthine phosphoribosyltransferase {ECO:0000313|EMBL:AIE87979.1}; TaxID=661478 species="Bacteria; Armatimonadetes; Fimbriimonadia; Fimbriimonadales; Fimbriimonadaceae; Fimbriimonas.;" source="Fimbriimonas ginsengisoli Gsoil 348.;"
SCNpilot_cont_500_bf_scaffold_16255_5
Fimbriimonas ginsengisoli, Fimbriimonas, Fimbriimonadales, Fimbriimonadia, Armatimonadetes, Bacteria

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3282..4052
DNA (771bp) protein (257aa)
Cystathionine beta-lyases/cystathionine gamma-synthases n=1 Tax=Chthonomonas calidirosea T49 RepID=S0ETY5_9BACT
Cys/Met metabolism pyridoxal-phosphate-dependent protein {ECO:0000313|EMBL:AIE88092.1}; TaxID=661478 species="Bacteria; Armatimonadetes; Fimbriimonadia; Fimbriimonadales; Fimbriimonadaceae; Fimbriimonas.;" source="Fimbriimonas ginsengisoli Gsoil 348.;"
Cystathionine beta-lyases/cystathionine gamma-synthases
SCNpilot_cont_500_bf_scaffold_16255_6
Fimbriimonas ginsengisoli, Fimbriimonas, Fimbriimonadales, Fimbriimonadia, Armatimonadetes, Bacteria

Not on your lists

4085..4567
DNA (483bp) protein (161aa)
Cystathionine beta-lyases/cystathionine gamma-synthases n=1 Tax=Chthonomonas calidirosea T49 RepID=S0ETY5_9BACT
Cys/Met metabolism pyridoxal-phosphate-dependent protein {ECO:0000313|EMBL:AIE88092.1}; TaxID=661478 species="Bacteria; Armatimonadetes; Fimbriimonadia; Fimbriimonadales; Fimbriimonadaceae; Fimbriimonas.;" source="Fimbriimonas ginsengisoli Gsoil 348.;"
Cystathionine beta-lyases/cystathionine gamma-synthases
SCNpilot_cont_500_bf_scaffold_16255_7
Ferrimonas balearica, Ferrimonas, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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4610..5161
DNA (552bp) protein (184aa)
Peptidase M61 domain protein n=1 Tax=Ferrimonas balearica (strain DSM 9799 / CCM 4581 / PAT) RepID=E1SPZ8_FERBD
peptidase M61 domain-containing protein
Peptidase M61 domain protein {ECO:0000313|EMBL:ADN75793.1}; TaxID=550540 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Ferrimonadaceae; Ferrimonas.;" source="Ferrimonas balearica (strain DSM 9799 / CCM 4581 / PAT).;"
Displaying 7 items

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