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SCNpilot_cont_500_bf_scaffold_6241

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Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_500_bf_scaffold_6241_1
Fimbriimonas ginsengisoli, Fimbriimonas, Fimbriimonadales, Fimbriimonadia, Armatimonadetes, Bacteria

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comp(1..534)
DNA (534bp) protein (178aa)
dehydrogenase E1 component; K00161 pyruvate dehydrogenase E1 component subunit alpha [EC:1.2.4.1]
Putative 2-oxoisovalerate dehydrogenase subunit alpha {ECO:0000313|EMBL:AIE87868.1}; TaxID=661478 species="Bacteria; Armatimonadetes; Fimbriimonadia; Fimbriimonadales; Fimbriimonadaceae; Fimbriimonas.;" source="Fimbriimonas ginsengisoli Gsoil 348.;"
Putative 2-oxoisovalerate dehydrogenase, alpha subunit (TPP-binding module) id=4837786 bin=GWC2_Deltaproteobacteria_66_88 species=Candidatus Nitrospira defluvii genus=Nitrospira taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWC2_Deltaproteobacteria_66_88 organism_group=Deltaproteobacteria
SCNpilot_cont_500_bf_scaffold_6241_2
Fimbriimonas ginsengisoli, Fimbriimonas, Fimbriimonadales, Fimbriimonadia, Armatimonadetes, Bacteria

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comp(488..1609)
DNA (1122bp) protein (374aa)
Thioredoxin domain-containing protein n=1 Tax=Marivirga tractuosa (strain ATCC 23168 / DSM 4126 / NBRC 15989 / NCIMB 1408 / VKM B-1430 / H-43) RepID=E4TRD2_MARTH
Thioredoxin domain-containing protein {ECO:0000313|EMBL:AIE87869.1}; TaxID=661478 species="Bacteria; Armatimonadetes; Fimbriimonadia; Fimbriimonadales; Fimbriimonadaceae; Fimbriimonas.;" source="Fimbriimonas ginsengisoli Gsoil 348.;"
thioredoxin domain-containing protein
SCNpilot_cont_500_bf_scaffold_6241_3
Fimbriimonas ginsengisoli, Fimbriimonas, Fimbriimonadales, Fimbriimonadia, Armatimonadetes, Bacteria

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1865..3061
DNA (1197bp) protein (399aa)
Uncharacterized protein {ECO:0000313|EMBL:AIE87870.1}; TaxID=661478 species="Bacteria; Armatimonadetes; Fimbriimonadia; Fimbriimonadales; Fimbriimonadaceae; Fimbriimonas.;" source="Fimbriimonas ginsengisoli Gsoil 348.;"
SCNpilot_cont_500_bf_scaffold_6241_4
Fimbriimonas ginsengisoli, Fimbriimonas, Fimbriimonadales, Fimbriimonadia, Armatimonadetes, Bacteria

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3049..3609
DNA (561bp) protein (187aa)
RNA polymerase subunit sigma24 n=1 Tax=Omnitrophica bacterium SCGC AAA257-O07 RepID=UPI0003B46920
RNA polymerase, sigma-24 subunit, ECF subfamily {ECO:0000313|EMBL:AIE87871.1}; TaxID=661478 species="Bacteria; Armatimonadetes; Fimbriimonadia; Fimbriimonadales; Fimbriimonadaceae; Fimbriimonas.;" source="Fimbriimonas ginsengisoli Gsoil 348.;"
ECF subfamily RNA polymerase sigma-24 subunit; K03088 RNA polymerase sigma-70 factor, ECF subfamily
SCNpilot_cont_500_bf_scaffold_6241_5
Fimbriimonas ginsengisoli, Fimbriimonas, Fimbriimonadales, Fimbriimonadia, Armatimonadetes, Bacteria

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3606..4367
DNA (762bp) protein (254aa)
Uncharacterized protein {ECO:0000313|EMBL:AIE87872.1}; TaxID=661478 species="Bacteria; Armatimonadetes; Fimbriimonadia; Fimbriimonadales; Fimbriimonadaceae; Fimbriimonas.;" source="Fimbriimonas ginsengisoli Gsoil 348.;"
SCNpilot_cont_500_bf_scaffold_6241_6
Fimbriimonas ginsengisoli, Fimbriimonas, Fimbriimonadales, Fimbriimonadia, Armatimonadetes, Bacteria

Not on your lists

4432..5145
DNA (714bp) protein (238aa)
Uncharacterized protein {ECO:0000313|EMBL:AIE87873.1}; TaxID=661478 species="Bacteria; Armatimonadetes; Fimbriimonadia; Fimbriimonadales; Fimbriimonadaceae; Fimbriimonas.;" source="Fimbriimonas ginsengisoli Gsoil 348.;"
SCNpilot_cont_500_bf_scaffold_6241_7
Fimbriimonas ginsengisoli, Fimbriimonas, Fimbriimonadales, Fimbriimonadia, Armatimonadetes, Bacteria

Not on your lists

5278..6888
DNA (1611bp) protein (537aa)
K(+)-insensitive pyrophosphate-energized proton pump {ECO:0000256|HAMAP-Rule:MF_01129}; EC=3.6.1.1 {ECO:0000256|HAMAP-Rule:MF_01129};; Membrane-bound proton-translocating pyrophosphatase {ECO:0000256|HAMAP-Rule:MF_01129}; Pyrophosphate-energized inorganic pyrophosphatase {ECO:0000256|HAMAP-Rule:MF_01129}; TaxID=661478 species="Bacteria; Armatimonadetes; Fimbriimonadia; Fimbriimonadales; Fimbriimonadaceae; Fimbriimonas.;" source="Fimbriimonas ginsengisoli Gsoil 348.;"
vacuolar-type H(+)-translocating pyrophosphatase (EC:3.6.1.1)
K(+)-insensitive pyrophosphate-energized proton pump n=1 Tax=Chthonomonas calidirosea T49 RepID=S0ETR2_9BACT
SCNpilot_cont_500_bf_scaffold_6241_8
Fimbriimonas ginsengisoli, Fimbriimonas, Fimbriimonadales, Fimbriimonadia, Armatimonadetes, Bacteria

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6986..8485
DNA (1500bp) protein (500aa)
K(+)-insensitive pyrophosphate-energized proton pump {ECO:0000256|HAMAP-Rule:MF_01129}; EC=3.6.1.1 {ECO:0000256|HAMAP-Rule:MF_01129};; Membrane-bound proton-translocating pyrophosphatase {ECO:0000256|HAMAP-Rule:MF_01129}; Pyrophosphate-energized inorganic pyrophosphatase {ECO:0000256|HAMAP-Rule:MF_01129}; TaxID=661478 species="Bacteria; Armatimonadetes; Fimbriimonadia; Fimbriimonadales; Fimbriimonadaceae; Fimbriimonas.;" source="Fimbriimonas ginsengisoli Gsoil 348.;"
vacuolar-type H(+)-translocating pyrophosphatase (EC:3.6.1.1)
K(+)-insensitive pyrophosphate-energized proton pump n=1 Tax=Chthonomonas calidirosea T49 RepID=S0ETR2_9BACT
SCNpilot_cont_500_bf_scaffold_6241_9
Fimbriimonas ginsengisoli, Fimbriimonas, Fimbriimonadales, Fimbriimonadia, Armatimonadetes, Bacteria

Not on your lists

8618..8863
DNA (246bp) protein (82aa)
Uncharacterized protein {ECO:0000313|EMBL:AIE87290.1}; TaxID=661478 species="Bacteria; Armatimonadetes; Fimbriimonadia; Fimbriimonadales; Fimbriimonadaceae; Fimbriimonas.;" source="Fimbriimonas ginsengisoli Gsoil 348.;"
SCNpilot_cont_500_bf_scaffold_6241_10
Fimbriimonas ginsengisoli, Fimbriimonas, Fimbriimonadales, Fimbriimonadia, Armatimonadetes, Bacteria

Not on your lists

comp(8866..10176)
DNA (1311bp) protein (437aa)
folylpolyglutamate synthase/dihydrofolate synthase (EC:6.3.2.17 6.3.2.12)
Folylpolyglutamate synthase/dihydrofolate synthase n=1 Tax=Chthonomonas calidirosea T49 RepID=S0F035_9BACT
FolC bifunctional protein {ECO:0000313|EMBL:AIE87388.1}; TaxID=661478 species="Bacteria; Armatimonadetes; Fimbriimonadia; Fimbriimonadales; Fimbriimonadaceae; Fimbriimonas.;" source="Fimbriimonas ginsengisoli Gsoil 348.;"
SCNpilot_cont_500_bf_scaffold_6241_11
Chthonomonas calidirosea, Chthonomonas, Chthonomonadales, Chthonomonadetes, Armatimonadetes, Bacteria

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comp(10270..11466)
DNA (1197bp) protein (399aa)
LL-diaminopimelate aminotransferase apoenzyme (EC:2.6.1.83) rbh
LL-diaminopimelate aminotransferase apoenzyme {ECO:0000313|EMBL:CCW35869.1}; EC=2.6.1.83 {ECO:0000313|EMBL:CCW35869.1};; TaxID=1303518 species="Bacteria; Armatimonadetes; Chthonomonadetes; Chthonomonadales; Chthonomonadaceae; Chthonomonas.;" source="Chthonomonas calidirosea (strain DSM 23976 / ICMP 18418 / T49).;"
LL-diaminopimelate aminotransferase apoenzyme n=1 Tax=Chthonomonas calidirosea T49 RepID=S0EVP4_9BACT rbh
SCNpilot_cont_500_bf_scaffold_6241_trna_1
unknown

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11589..11661
DNA (73bp)
transferRNA
SCNpilot_cont_500_bf_scaffold_6241_12
Fimbriimonas ginsengisoli, Fimbriimonas, Fimbriimonadales, Fimbriimonadia, Armatimonadetes, Bacteria

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comp(11729..12520)
DNA (792bp) protein (264aa)
Uncharacterized protein {ECO:0000313|EMBL:AIE84395.1}; TaxID=661478 species="Bacteria; Armatimonadetes; Fimbriimonadia; Fimbriimonadales; Fimbriimonadaceae; Fimbriimonas.;" source="Fimbriimonas ginsengisoli Gsoil 348.;"
SCNpilot_cont_500_bf_scaffold_6241_13
unknown

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12821..13009
DNA (189bp) protein (63aa)

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Displaying 14 items

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