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SCNpilot_cont_500_bf_scaffold_36115

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Displaying 4 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_500_bf_scaffold_36115_1

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comp(2..262)
DNA (261bp) protein (87aa)
Omp A family outer membrane protein n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9G2C1_SORC5
Marine sediment metagenome DNA, contig: S03H2_S23574 {ECO:0000313|EMBL:GAH87253.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
ompA family outer membrane protein
SCNpilot_cont_500_bf_scaffold_36115_2
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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595..753
DNA (159bp) protein (53aa)
50S ribosomal protein L34 n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=RL34_SORC5
rpmH; 50S ribosomal protein L34; K02914 large subunit ribosomal protein L34
50S ribosomal protein L34 {ECO:0000255|HAMAP-Rule:MF_00391}; TaxID=448385 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum (strain So ce56) (Polyangium cellulosum (strain; So ce56)).;"
SCNpilot_cont_500_bf_scaffold_36115_3
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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891..1253
DNA (363bp) protein (121aa)
ribonuclease P protein component; K03536 ribonuclease P protein component [EC:3.1.26.5]
Ribonuclease P protein component {ECO:0000256|HAMAP-Rule:MF_00227, ECO:0000256|SAAS:SAAS00143752}; Short=RNase P protein {ECO:0000256|HAMAP-Rule:MF_00227};; Short=RNaseP protein {ECO:0000256|HAMAP-Rule:MF_00227};; EC=3.1.26.5 {ECO:0000256|HAMAP-Rule:MF_00227, ECO:0000256|SAAS:SAAS00143815};; Protein C5 {ECO:0000256|HAMAP-Rule:MF_00227}; TaxID=448385 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum (strain So ce56) (P
Putative ribonuclease P protein component n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9G6E2_SORC5
SCNpilot_cont_500_bf_scaffold_36115_4
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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1570..3018
DNA (1449bp) protein (483aa)
Membrane protein insertase YidC n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9G6D5_SORC5 rbh
oxaA; inner-membrane protein; K03217 preprotein translocase subunit YidC rbh
Membrane protein insertase YidC {ECO:0000256|HAMAP-Rule:MF_01810, ECO:0000256|SAAS:SAAS00003942}; Foldase YidC {ECO:0000256|HAMAP-Rule:MF_01810}; Membrane integrase YidC {ECO:0000256|HAMAP-Rule:MF_01810}; Membrane protein YidC {ECO:0000256|HAMAP-Rule:MF_01810}; TaxID=448385 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum (strain So ce56) (Polyangium cellulosum (strain; So ce56)).;"
Displaying 4 items

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