ggKbase home page

SCNpilot_cont_500_bf_scaffold_44854

Search features with annotation key words

Displaying 4 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_500_bf_scaffold_44854_1
R_Alphaproteobacteria_42_30, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

97..435
DNA (339bp) protein (113aa)
shikimate kinase; K13829 shikimate kinase / 3-dehydroquinate synthase [EC:2.7.1.71 4.2.3.4]
Shikimate kinase n=1 Tax=uncultured bacterium RepID=K2EVH1_9BACT
Tax=RIFCSPHIGHO2_02_FULL_Alphaproteobacteria_42_30_curated
SCNpilot_cont_500_bf_scaffold_44854_2
R_Alphaproteobacteria_42_30, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

457..654
DNA (198bp) protein (66aa)
shikimate kinase; K00891 shikimate kinase [EC:2.7.1.71]
Shikimate kinase id=3710730 bin=GWC2_Alphaproteobacteria_42_16 species=Rhodospirillum centenum genus=Rhodospirillum taxon_order=Rhodospirillales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Alphaproteobacteria_42_16 organism_group=Alphaproteobacteria organism_desc=Rhodospirillales related? Good +
Tax=RIFCSPHIGHO2_02_FULL_Alphaproteobacteria_42_30_curated
SCNpilot_cont_500_bf_scaffold_44854_3

Not on your lists

830..1735
DNA (906bp) protein (302aa)
Putative VacJ-like lipoprotein id=3710729 bin=GWC2_Alphaproteobacteria_42_16 species=Azospirillum lipoferum genus=Azospirillum taxon_order=Rhodospirillales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Alphaproteobacteria_42_16 organism_group=Alphaproteobacteria organism_desc=Rhodospirillales related? Good +
Lipoprotein {ECO:0000313|EMBL:EKE09620.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
outer membrane lipoprotein; K04754 lipoprotein
SCNpilot_cont_500_bf_scaffold_44854_4

Not on your lists

1767..2255
DNA (489bp) protein (163aa)
Toluene tolerance transporter putative id=3710727 bin=GWC2_Alphaproteobacteria_42_16 species=Oceanibaculum indicum genus=Oceanibaculum taxon_order=Rhodospirillales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Alphaproteobacteria_42_16 organism_group=Alphaproteobacteria organism_desc=Rhodospirillales related? Good +
Uncharacterized protein {ECO:0000313|EMBL:EKE09621.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
putative ABC transporter involved in resistance to organic solvents
Displaying 4 items

View Taxonomy