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SCNpilot_P_inoc_Niastella_42_33

SCNPILOT_CONT_500_BF_Sphingobacteriales_43_3
In projects: SCNPILOT_CONT_500_BF

Consensus taxonomy: Sphingobacteriales  →  Sphingobacteriia  →  Bacteroidetes  →  Bacteria

Metagenomic Context

Parent: SCNpilot_cont_500_bf_UNK

Properties

Avg. coverage: 3.22 Longest contig: 4.71 Kbp Bin length: 906.90 Kbp GC content: 43.09 %
Contigs count: 609 Features count: 1223 rRNAs count: 0 tRNAs count: 3

Genome completeness

partial RP 11 / 55 BSCG 15 / 51 ASCG 3 / 38
Displaying items 251-300 of 609 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
SCNpilot_cont_500_bf_scaffold_16537
Species: Gillisia limnaea (50%)
2 3084 bp 41.50 3.40 95.14
SCNpilot_cont_500_bf_scaffold_60513
Species: Flavobacterium sp. EM1308 (50%)
2 1113 bp 41.15 2.70 67.92
SCNpilot_cont_500_bf_scaffold_62870
Species: Niastella koreensis (100%)
2 1073 bp 45.11 2.80 90.03
SCNpilot_cont_500_bf_scaffold_29194
Species: Niabella soli (50%)
2 2010 bp 46.32 3.86 84.78
SCNpilot_cont_500_bf_scaffold_65466
Species: Fibrisoma limi (50%)
2 1030 bp 40.87 1.70 73.98
SCNpilot_cont_500_bf_scaffold_65979
Species: Pedobacter sp. NL19 (50%)
2 1022 bp 47.55 2.69 99.80
SCNpilot_cont_500_bf_scaffold_51683
Species: Mucilaginibacter paludis (50%)
2 1272 bp 46.31 2.36 89.15
SCNpilot_cont_500_bf_scaffold_61159
Species: Flavobacterium sp. EM1321 (50%)
2 1765 bp 45.95 2.83 82.95
SCNpilot_cont_500_bf_scaffold_54296
Species: Niabella soli (50%)
2 1224 bp 45.92 4.08 92.16
SCNpilot_cont_500_bf_scaffold_53324
Species: Pseudopedobacter saltans (50%)
2 1241 bp 37.55 4.43 74.46
SCNpilot_cont_500_bf_scaffold_47204
Species: Niastella koreensis (100%)
2 1368 bp 44.74 2.56 85.53
SCNpilot_cont_500_bf_scaffold_34641
Species: Niabella soli (50%)
2 1758 bp 46.64 2.84 96.08
SCNpilot_cont_500_bf_scaffold_43233
Species: Niabella soli (100%)
2 1469 bp 47.24 2.72 93.94
SCNpilot_cont_500_bf_scaffold_39913
Species: Niabella soli (50%)
2 1568 bp 46.11 2.71 79.78
SCNpilot_cont_500_bf_scaffold_34642
Species: Niastella koreensis (50%)
2 1758 bp 43.63 4.27 77.99
SCNpilot_cont_500_bf_scaffold_65990
Species: RIFOXYD12_FULL_Deltaproteobacteria_57_12_curated (50%)
2 1022 bp 34.34 3.42 57.24
SCNpilot_cont_500_bf_scaffold_58086
Species: Flavihumibacter sp. ZG627 (100%)
2 1154 bp 42.98 2.60 98.53
SCNpilot_cont_500_bf_scaffold_59983
Species: Dyadobacter fermentans (50%)
2 1122 bp 44.83 4.23 100.27
SCNpilot_cont_500_bf_scaffold_44016
Species: Flavihumibacter petaseus (100%)
2 1449 bp 43.69 4.14 91.93
SCNpilot_cont_500_bf_scaffold_67098
Species: GWA2_Bacteroidetes_32_17_curated (50%)
2 1005 bp 44.18 2.99 64.48
SCNpilot_cont_500_bf_scaffold_61427
Species: Pseudopedobacter saltans (50%)
2 1097 bp 42.11 2.73 79.85
SCNpilot_cont_500_bf_scaffold_41783
Species: Pedobacter sp. V48 (50%)
2 1511 bp 40.90 2.15 84.98
SCNpilot_cont_500_bf_scaffold_49652
Species: Niastella koreensis (100%)
2 1313 bp 41.58 3.24 66.03
SCNpilot_cont_500_bf_scaffold_51958
Species: Pseudopedobacter saltans (50%)
2 1266 bp 46.21 2.76 97.87
SCNpilot_cont_500_bf_scaffold_41787
Species: Niastella koreensis (50%)
2 1511 bp 44.34 2.65 90.93
SCNpilot_cont_500_bf_scaffold_48512
Species: Gimesia maris (50%)
2 1336 bp 46.03 2.99 97.46
SCNpilot_cont_500_bf_scaffold_35493
Species: Niabella soli (50%)
2 1724 bp 45.24 3.19 85.27
SCNpilot_cont_500_bf_scaffold_61178
Species: Flavihumibacter sp. ZG627 (50%)
2 1101 bp 45.14 2.72 83.38
SCNpilot_cont_500_bf_scaffold_39670
Species: Chitinophaga pinensis (50%)
2 1575 bp 45.40 3.49 75.43
SCNpilot_cont_500_bf_scaffold_52266
Species: Saprospira grandis (50%)
2 1260 bp 43.41 2.78 88.10
SCNpilot_cont_500_bf_scaffold_52522
Species: Bacteroides cellulosilyticus (50%)
2 1255 bp 41.35 3.59 67.17
SCNpilot_cont_500_bf_scaffold_59739
Species: Flavihumibacter sp. ZG627 (50%)
2 1125 bp 43.47 2.44 92.53
SCNpilot_cont_500_bf_scaffold_36599
Species: GWF2_Bacteroidetes_35_48_curated (50%)
2 1680 bp 38.63 2.68 98.21
SCNpilot_cont_500_bf_scaffold_48772
Species: Niastella koreensis (50%)
2 1331 bp 45.45 3.19 90.38
SCNpilot_cont_500_bf_scaffold_54828
Species: RIFOXYD2_FULL_Sphingobacteria_35_12_curated (50%)
2 1213 bp 46.08 2.27 96.70
SCNpilot_cont_500_bf_scaffold_54829
Species: Flavobacterium sp. AED (50%)
2 1213 bp 45.09 3.30 94.23
SCNpilot_cont_500_bf_scaffold_56158
Species: Cyclobacterium marinum (50%)
2 1188 bp 48.74 3.79 90.66
SCNpilot_cont_500_bf_scaffold_31474
Species: Flammeovirgaceae bacterium 311 (50%)
2 1893 bp 44.06 2.77 88.59
SCNpilot_cont_500_bf_scaffold_50894
Species: Chitinophaga pinensis (50%)
2 1287 bp 46.39 3.50 97.67
SCNpilot_cont_500_bf_scaffold_56159
Species: Niabella soli (50%)
2 1188 bp 48.48 2.95 82.32
SCNpilot_cont_500_bf_scaffold_38531
Species: Mucilaginibacter paludis (50%)
2 1611 bp 46.87 4.35 89.01
SCNpilot_cont_500_bf_scaffold_35501
Species: Niabella soli (50%)
2 1723 bp 44.05 2.90 97.50
SCNpilot_cont_500_bf_scaffold_54321
Species: Hassallia byssoidea (50%)
2 1223 bp 46.03 3.27 79.48
SCNpilot_cont_500_bf_scaffold_32070
Species: Flavihumibacter petaseus (50%)
2 1865 bp 46.70 2.82 98.77
SCNpilot_cont_500_bf_scaffold_47226
Species: Niabella soli (50%)
2 2029 bp 43.37 2.96 88.71
SCNpilot_cont_500_bf_scaffold_52018
Species: Niastella koreensis (100%)
2 1265 bp 40.63 3.16 70.43
SCNpilot_cont_500_bf_scaffold_52530
Species: Niastella koreensis (50%)
2 1255 bp 42.39 5.18 93.47
SCNpilot_cont_500_bf_scaffold_32583
Species: Flavihumibacter sp. ZG627 (50%)
2 1844 bp 43.11 4.34 84.44
SCNpilot_cont_500_bf_scaffold_66796
Species: Flavihumibacter petaseus (50%)
2 1010 bp 45.74 2.48 92.67
SCNpilot_cont_500_bf_scaffold_33672
Species: Pseudopedobacter saltans (100%)
2 1797 bp 46.30 3.62 99.33
Displaying items 251-300 of 609 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.