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SCNpilot_cont_500_bf_scaffold_2094

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Displaying 20 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_500_bf_scaffold_2094_trna_1
unknown

Not on your lists

12..85
DNA (74bp)
transferRNA
SCNpilot_cont_500_bf_scaffold_2094_1
Frankia sp. EuI1c, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

230..1096
DNA (867bp) protein (289aa)
Integrase family protein n=1 Tax=Frankia sp. (strain EuI1c) RepID=E3J6D8_FRASU rbh
integrase family protein rbh
Integrase family protein {ECO:0000313|EMBL:ADP79565.1}; TaxID=298654 species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. (strain EuI1c).;"
SCNpilot_cont_500_bf_scaffold_2094_2
unknown

Not on your lists

1093..1731
DNA (639bp) protein (213aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_2094_3
Geodermatophilus obscurus, Geodermatophilus, Geodermatophilales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

1863..2138
DNA (276bp) protein (92aa)
Uncharacterized protein n=1 Tax=Geodermatophilus obscurus (strain ATCC 25078 / DSM 43160 / JCM 3152 / G-20) RepID=D2SBN1_GEOOG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADB76138.1}; TaxID=526225 species="Bacteria; Actinobacteria; Geodermatophilales; Geodermatophilaceae; Geodermatophilus.;" source="Geodermatophilus obscurus (strain ATCC 25078 / DSM 43160 / JCM 3152 /; G-20).;"
SCNpilot_cont_500_bf_scaffold_2094_4
unknown

Not on your lists

2138..2458
DNA (321bp) protein (107aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_2094_5
Actinomyces urogenitalis, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

2455..3807
DNA (1353bp) protein (451aa)
hypothetical protein n=1 Tax=Pseudonocardia sp. P1 RepID=UPI0001FFEC41
Uncharacterized protein {ECO:0000313|EMBL:ETJ03701.1}; TaxID=1403939 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces urogenitalis DORA_12.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_2094_6
Mycobacterium rhodesiae, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3879..4586)
DNA (708bp) protein (236aa)
Resolvase domain protein n=1 Tax=Mycobacterium rhodesiae JS60 RepID=G4HZH4_MYCRH
Resolvase domain protein {ECO:0000313|EMBL:EHB55710.1}; TaxID=931627 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium rhodesiae JS60.;"
resolvase
SCNpilot_cont_500_bf_scaffold_2094_7
unknown

Not on your lists

4657..5289
DNA (633bp) protein (211aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_2094_8
Planctopirus limnophila, Planctopirus, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

5279..6775
DNA (1497bp) protein (499aa)
Phage terminase-like protein protein large subunit-like protein n=1 Tax=Planctomyces limnophilus (strain ATCC 43296 / DSM 3776 / IFAM 1008 / 290) RepID=D5SVR4_PLAL2
phage terminase large subunit-like protein
Phage terminase-like protein protein large subunit-like protein {ECO:0000313|EMBL:ADG69424.1}; TaxID=521674 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Planctopirus.;" source="Planctopirus limnophila (strain ATCC 43296 / DSM 3776 / IFAM 1008 /; 290) (Planctomyces limnophilus).;"
SCNpilot_cont_500_bf_scaffold_2094_9
unknown

Not on your lists

6772..7176
DNA (405bp) protein (135aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_2094_10
unknown

Not on your lists

7180..7773
DNA (594bp) protein (198aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_2094_11
unknown

Not on your lists

7776..7964
DNA (189bp) protein (63aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_2094_12
unknown

Not on your lists

8191..8844
DNA (654bp) protein (218aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_2094_13
Rhodococcus opacus, Rhodococcus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

8948..9967
DNA (1020bp) protein (340aa)
ATPase n=1 Tax=Salinispora pacifica RepID=UPI0003729292 rbh
Uncharacterized protein {ECO:0000313|EMBL:AHK29117.1}; TaxID=543736 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcus opacus PD630.;"
ATPase rbh
SCNpilot_cont_500_bf_scaffold_2094_14
Trueperella pyogenes, Trueperella, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(10090..11382)
DNA (1293bp) protein (431aa)
Rep n=1 Tax=Trueperella pyogenes RepID=P94171_9ACTO
Rep {ECO:0000313|EMBL:AAC46399.1}; TaxID=1661 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Trueperella.;" source="Trueperella pyogenes.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_2094_15
Pseudonocardia autotrophica, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(11645..12778)
DNA (1134bp) protein (378aa)
hypothetical protein n=1 Tax=Pseudonocardia sp. P1 RepID=UPI0001FFDB93 rbh
Uncharacterized protein {ECO:0000313|EMBL:BAJ53860.1}; TaxID=2074 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia autotrophica (Amycolata autotrophica) (Nocardia; autotrophica).;"
SCNpilot_cont_500_bf_scaffold_2094_16
unknown

Not on your lists

comp(12932..13306)
DNA (375bp) protein (125aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_2094_17
unknown

Not on your lists

comp(13380..13691)
DNA (312bp) protein (104aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_2094_18
Actinosynnema mirum, Actinosynnema, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(13948..14853)
DNA (906bp) protein (302aa)
Integrase family protein n=1 Tax=Actinosynnema mirum (strain ATCC 29888 / DSM 43827 / NBRC 14064 / IMRU 3971) RepID=C6WQ17_ACTMD
integrase family protein
Integrase family protein {ECO:0000313|EMBL:ACU35073.1}; TaxID=446462 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Actinosynnema.;" source="Actinosynnema mirum (strain ATCC 29888 / DSM 43827 / NBRC 14064 / IMRU; 3971).;"
SCNpilot_cont_500_bf_scaffold_2094_19
Rhodococcus jostii, Rhodococcus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(15100..15486)
DNA (387bp) protein (129aa)
transposase IS110 n=1 Tax=Rhodococcus sp. DK17 RepID=UPI00037E1EFA
TnpA family transposase
Probable transposase, TnpA family protein {ECO:0000313|EMBL:ABH00018.1}; TaxID=101510 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcus jostii (strain RHA1).;"
Displaying 20 items

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