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SCNpilot_cont_500_bf_scaffold_2880

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Displaying 20 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_500_bf_scaffold_2880_1
Streptomyces collinus, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

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comp(17..292)
DNA (276bp) protein (92aa)
Uncharacterized protein n=1 Tax=Streptomyces collinus Tu 365 RepID=S5V9C9_STRCU
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGS67112.1}; TaxID=1214242 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces collinus Tu 365.;"
SCNpilot_cont_500_bf_scaffold_2880_2
unknown

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393..542
DNA (150bp) protein (50aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_2880_3
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

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621..2168
DNA (1548bp) protein (516aa)
Integrase catalytic region n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CK87_PSEUX rbh
integrase catalytic subunit rbh
Integrase catalytic region {ECO:0000313|EMBL:AEA28155.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;"
SCNpilot_cont_500_bf_scaffold_2880_4
unknown

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comp(2113..2295)
DNA (183bp) protein (61aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_2880_5
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

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2544..2996
DNA (453bp) protein (151aa)
IstB domain protein ATP-binding protein n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CK48_PSEUX
IstB domain-containing protein ATP-binding protein
IstB domain protein ATP-binding protein {ECO:0000313|EMBL:AEA28154.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;"
SCNpilot_cont_500_bf_scaffold_2880_6
Rhodococcus opacus, Rhodococcus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

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comp(3045..3434)
DNA (390bp) protein (130aa)
hypothetical protein n=1 Tax=Kocuria sp. UCD-OTCP RepID=UPI00037FE587
Uncharacterized protein {ECO:0000313|EMBL:AII10882.1}; TaxID=37919 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcus opacus (Nocardia opaca).;"
SCNpilot_cont_500_bf_scaffold_2880_7

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comp(3863..5017)
DNA (1155bp) protein (385aa)
ThrC; threonine synthase (EC:4.2.3.1); K01733 threonine synthase [EC:4.2.3.1]
Uncharacterized protein {ECO:0000313|EMBL:KKR60778.1}; TaxID=1618817 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWA2_40_37.;"
Threonine synthase id=4424807 bin=GWC2_Methylomirabilis_70_24 species=unknown genus=Methanotorris taxon_order=Methanococcales taxon_class=Methanococci phylum=Euryarchaeota tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
SCNpilot_cont_500_bf_scaffold_2880_8
unknown

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comp(5128..5247)
DNA (120bp) protein (40aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_2880_9
unknown

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5679..5891
DNA (213bp) protein (71aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_2880_10
unknown

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5922..6185
DNA (264bp) protein (88aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_2880_11
unknown

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6187..6330
DNA (144bp) protein (48aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_2880_12

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comp(6416..6805)
DNA (390bp) protein (130aa)
Transposase IS4 family protein n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F2L6H7_PSEUX
Putative transposase for insertion sequence {ECO:0000313|EMBL:AHE14669.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
transposase IS4 family protein
SCNpilot_cont_500_bf_scaffold_2880_13
Saccharopolyspora erythraea, Saccharopolyspora, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

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7028..8011
DNA (984bp) protein (328aa)
feruloyl esterase (EC:3.1.1.73)
Feruloyl esterase {ECO:0000313|EMBL:CAM02641.1}; EC=3.1.1.73 {ECO:0000313|EMBL:CAM02641.1};; Putative transposase {ECO:0000313|EMBL:CAM01880.1}; EC=3.1.1.73 {ECO:0000313|EMBL:CAM02906.1};; TaxID=405948 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Saccharopolyspora.;" source="Saccharopolyspora erythraea (strain NRRL 23338).;"
Transposase n=3 Tax=Saccharopolyspora erythraea (strain NRRL 23338) RepID=A4FBU5_SACEN
SCNpilot_cont_500_bf_scaffold_2880_14
GWA2_OP11_ACD38-rel_39_33, Daviesbacteria, Microgenomates, Bacteria

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comp(8127..9074)
DNA (948bp) protein (316aa)
hypothetical protein n=1 Tax=Streptomyces sp. 303MFCol5.2 RepID=UPI00037E7614
Uncharacterized protein {ECO:0000313|EMBL:KKR17357.1}; TaxID=1618423 species="Bacteria; Microgenomates.;" source="Microgenomates (Daviesbacteria) bacterium GW2011_GWA2_39_33.;"
SCNpilot_cont_500_bf_scaffold_2880_15
GWC2_Nitrospirae_57_13_curated, Nitrospirae, Bacteria

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comp(9097..10095)
DNA (999bp) protein (333aa)
glucokinase; K00845 glucokinase [EC:2.7.1.2]
Glucokinase id=4125328 bin=GWC2_Nitrospirae_57_13 species=Thermincola potens genus=Thermincola taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWC2_Nitrospirae_57_13 organism_group=Nitrospirae organism_desc=Same as C1_57_7 and D2_57_8
Tax=GWC2_Nitrospirae_57_13_curated
SCNpilot_cont_500_bf_scaffold_2880_16
unknown

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comp(10475..10609)
DNA (135bp) protein (45aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_2880_17
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

10882..11250
DNA (369bp) protein (123aa)
Transposase mutator type n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CK53_PSEUX
transposase mutator type
Transposase mutator type {ECO:0000313|EMBL:AEA28159.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;"
SCNpilot_cont_500_bf_scaffold_2880_18
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

11192..11404
DNA (213bp) protein (71aa)
Transposase mutator type n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CK53_PSEUX
transposase mutator type
Transposase mutator type {ECO:0000313|EMBL:AEA28159.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;"
SCNpilot_cont_500_bf_scaffold_2880_19
Mycobacterium vanbaalenii, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

11401..11814
DNA (414bp) protein (138aa)
Transposase, mutator type n=1 Tax=Mycobacterium vanbaalenii (strain DSM 7251 / PYR-1) RepID=A1T2J4_MYCVP
transposase, mutator type
Transposase, mutator type {ECO:0000313|EMBL:ABM11394.1}; TaxID=350058 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium vanbaalenii (strain DSM 7251 / PYR-1).;"
SCNpilot_cont_500_bf_scaffold_2880_20
unknown

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comp(11883..12026)
DNA (144bp) protein (48aa)

This feature has no annotations

Displaying 20 items

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