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SCNpilot_cont_500_bf_scaffold_1400

Search features with annotation key words

Displaying 26 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_500_bf_scaffold_1400_1
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(489..1139)
DNA (651bp) protein (217aa)
Regulatory protein TetR n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4D064_PSEUX
TetR family transcriptional regulator
Regulatory protein TetR {ECO:0000313|EMBL:AEA25720.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;"
SCNpilot_cont_500_bf_scaffold_1400_2
unknown

Not on your lists

comp(1421..1687)
DNA (267bp) protein (89aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_1400_3
unknown

Not on your lists

comp(2184..2471)
DNA (288bp) protein (96aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_1400_4
unknown

Not on your lists

comp(2494..3039)
DNA (546bp) protein (182aa)
DoxX family protein n=1 Tax=Mycobacterium tusciae JS617 RepID=H1JYQ6_9MYCO
putative Rieske iron-sulfur protein
SCNpilot_cont_500_bf_scaffold_1400_5
Saccharomonospora marina, Saccharomonospora, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

3353..4471
DNA (1119bp) protein (373aa)
Butyryl-CoA dehydrogenase n=1 Tax=Saccharomonospora paurometabolica YIM 90007 RepID=G4IXT3_9PSEU rbh
Acyl-CoA dehydrogenase {ECO:0000313|EMBL:EHR50771.1}; TaxID=882083 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Saccharomonospora.;" source="Saccharomonospora marina XMU15.;"
acyl-CoA dehydrogenase domain-containing protein rbh
SCNpilot_cont_500_bf_scaffold_1400_6
marine actinobacterium PHSC20C1, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

4512..5324
DNA (813bp) protein (271aa)
Uncharacterized protein n=1 Tax=marine actinobacterium PHSC20C1 RepID=A4AL28_9ACTN rbh
Uncharacterized protein {ECO:0000313|EMBL:EAR24004.1}; TaxID=312284 species="Bacteria; Actinobacteria.;" source="marine actinobacterium PHSC20C1.;"
hypothetical protein rbh
SCNpilot_cont_500_bf_scaffold_1400_7
marine actinobacterium PHSC20C1, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

5318..6316
DNA (999bp) protein (333aa)
MoaA-related protein n=1 Tax=marine actinobacterium PHSC20C1 RepID=A4AL27_9ACTN rbh
MoaA-related protein {ECO:0000313|EMBL:EAR24003.1}; TaxID=312284 species="Bacteria; Actinobacteria.;" source="marine actinobacterium PHSC20C1.;"
radical SAM domain-containing protein rbh
SCNpilot_cont_500_bf_scaffold_1400_8
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(6324..7115)
DNA (792bp) protein (264aa)
Purine or other phosphorylase family 1 n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CXD5_PSEUX rbh
purine or other phosphorylase 1 rbh
Purine or other phosphorylase family 1 {ECO:0000313|EMBL:AEA26509.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;"
SCNpilot_cont_500_bf_scaffold_1400_9
Ktedonobacter racemifer, Ktedonobacter, Ktedonobacterales, Ktedonobacteria, Chloroflexi, Bacteria

Not on your lists

comp(7215..7691)
DNA (477bp) protein (159aa)
Integral-membrane protein n=1 Tax=Ktedonobacter racemifer DSM 44963 RepID=D6TM89_9CHLR
Integral-membrane protein {ECO:0000313|EMBL:EFH86889.1}; TaxID=485913 species="Bacteria; Chloroflexi; Ktedonobacteria; Ktedonobacterales; Ktedonobacteraceae; Ktedonobacter.;" source="Ktedonobacter racemifer DSM 44963.;"
SCNpilot_cont_500_bf_scaffold_1400_10
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7775..8374
DNA (600bp) protein (200aa)
hypothetical protein n=1 Tax=Catelliglobosispora koreensis RepID=UPI0003648ACD
hypothetical protein
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_500_bf_scaffold_1400_11
Streptomyces coelicoflavus, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(8301..9023)
DNA (723bp) protein (241aa)
Uncharacterized protein n=1 Tax=Streptomyces coelicoflavus ZG0656 RepID=H1Q951_9ACTO
Uncharacterized protein {ECO:0000313|EMBL:EHN79062.1}; TaxID=1120227 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces coelicoflavus ZG0656.;"
SCNpilot_cont_500_bf_scaffold_1400_12
Cryptosporangium arvum, Cryptosporangium, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(9005..9343)
DNA (339bp) protein (113aa)
hypothetical protein n=1 Tax=Kribbella catacumbae RepID=UPI00036E8F22
Putative transcriptional regulator {ECO:0000313|EMBL:EXG82474.1}; TaxID=927661 species="Bacteria; Actinobacteria; Frankiales; Cryptosporangiaceae; Cryptosporangium.;" source="Cryptosporangium arvum DSM 44712.;"
PadR-like family transcriptional regulator
SCNpilot_cont_500_bf_scaffold_1400_13
Nocardioides sp. JS614, Nocardioides, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

9443..9769
DNA (327bp) protein (109aa)
Uncharacterized protein n=1 Tax=Nocardioides sp. (strain BAA-499 / JS614) RepID=A1SC74_NOCSJ
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABL79409.1}; TaxID=196162 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Nocardioides.;" source="Nocardioides sp. (strain BAA-499 / JS614).;"
SCNpilot_cont_500_bf_scaffold_1400_14
Frankia sp. EuI1c, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

9766..10863
DNA (1098bp) protein (366aa)
Ankyrin n=1 Tax=Frankia sp. (strain EuI1c) RepID=E3J0D1_FRASU
ankyrin
Ankyrin {ECO:0000313|EMBL:ADP81560.1}; TaxID=298654 species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. (strain EuI1c).;"
SCNpilot_cont_500_bf_scaffold_1400_15
Kibdelosporangium sp. MJ126-NF4, Kibdelosporangium, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(10837..11007)
DNA (171bp) protein (57aa)
Transposase n=1 Tax=Williamsia sp. D3 RepID=V8CTZ1_9ACTO
TnpA transposase {ECO:0000313|EMBL:CEL23484.1}; TaxID=703222 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Kibdelosporangium.;" source="Kibdelosporangium sp. MJ126-NF4.;"
putative transposase
SCNpilot_cont_500_bf_scaffold_1400_16
Streptomyces sp. C, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(11035..11853)
DNA (819bp) protein (273aa)
Resolvase n=1 Tax=Streptomyces sp. C RepID=D9W467_9ACTO rbh
Resolvase {ECO:0000313|EMBL:EFL19695.1}; TaxID=253839 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. C.;"
resolvase domain-containing protein
SCNpilot_cont_500_bf_scaffold_1400_17
Kribbella flavida, Kribbella, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(12013..13356)
DNA (1344bp) protein (448aa)
molybdenum cofactor synthesis domain-containing protein; K03750 molybdopterin molybdotransferase [EC:2.10.1.1]; K07219 putative molybdopterin biosynthesis protein
hypothetical protein n=1 Tax=Sporichthya polymorpha RepID=UPI000379491F
Molybdenum cofactor synthesis domain protein {ECO:0000313|EMBL:ADB31202.1}; Flags: Precursor;; TaxID=479435 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Kribbella.;" source="Kribbella flavida (strain DSM 17836 / JCM 10339 / NBRC 14399).;"
SCNpilot_cont_500_bf_scaffold_1400_18
unknown

Not on your lists

comp(13349..13462)
DNA (114bp) protein (38aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_1400_19
Actinokineospora spheciospongiae, Actinokineospora, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(13459..14085)
DNA (627bp) protein (209aa)
hypothetical protein n=1 Tax=Sporichthya polymorpha RepID=UPI0003671A42
Protein FdhD homolog {ECO:0000256|HAMAP-Rule:MF_00187, ECO:0000256|SAAS:SAAS00093832}; TaxID=909613 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Actinokineospora.;" source="Actinokineospora spheciospongiae.;"
protein fdhD; K02379 FdhD protein
SCNpilot_cont_500_bf_scaffold_1400_20
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(14225..15412)
DNA (1188bp) protein (396aa)
Molybdopterin oxidoreductase Fe4S4 region n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CX45_PSEUX rbh
molybdopterin oxidoreductase Fe4S4 region rbh
Molybdopterin oxidoreductase Fe4S4 region {ECO:0000313|EMBL:AEA25486.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;"
SCNpilot_cont_500_bf_scaffold_1400_21
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(15409..17331)
DNA (1923bp) protein (641aa)
respiratory-chain NADH dehydrogenase domain 51 kDa subunit; K00335 NADH-quinone oxidoreductase subunit F [EC:1.6.5.3] rbh
Respiratory-chain NADH dehydrogenase domain 51 kDa subunit n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CX46_PSEUX rbh
Respiratory-chain NADH dehydrogenase domain 51 kDa subunit {ECO:0000313|EMBL:AEA25487.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;"
SCNpilot_cont_500_bf_scaffold_1400_22
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(17344..19005)
DNA (1662bp) protein (554aa)
nitrate reductase; K00123 formate dehydrogenase, alpha subunit [EC:1.2.1.2] rbh
Nitrate reductase {ECO:0000313|EMBL:AEA25488.1}; EC=1.7.99.4 {ECO:0000313|EMBL:AEA25488.1};; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;"
Nitrate reductase n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CX47_PSEUX rbh
SCNpilot_cont_500_bf_scaffold_1400_23
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(19036..19284)
DNA (249bp) protein (83aa)
nitrate reductase; K00123 formate dehydrogenase, alpha subunit [EC:1.2.1.2]
Nitrate reductase {ECO:0000313|EMBL:AEA25488.1}; EC=1.7.99.4 {ECO:0000313|EMBL:AEA25488.1};; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;"
Nitrate reductase n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CX47_PSEUX
SCNpilot_cont_500_bf_scaffold_1400_24
Streptomyces ghanaensis, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

19368..20066
DNA (699bp) protein (233aa)
Putative uncharacterized protein (Fragment) n=1 Tax=Streptomyces ghanaensis ATCC 14672 RepID=D5ZSN5_9ACTO
Putative uncharacterized protein {ECO:0000313|EMBL:EFE64756.2}; Flags: Fragment;; TaxID=566461 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces ghanaensis ATCC 14672.;"
putative transposase
SCNpilot_cont_500_bf_scaffold_1400_25
Saccharopolyspora rectivirgula, Saccharopolyspora, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(20092..21141)
DNA (1050bp) protein (350aa)
Cyclic pyranopterin monophosphate synthase {ECO:0000256|HAMAP-Rule:MF_01225}; EC=4.1.99.18 {ECO:0000256|HAMAP-Rule:MF_01225};; Molybdenum cofactor biosynthesis protein A {ECO:0000256|HAMAP-Rule:MF_01225}; TaxID=28042 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Saccharopolyspora.;" source="Saccharopolyspora rectivirgula.;"
molybdenum cofactor biosynthesis protein MoeA n=1 Tax=Humibacter albus RepID=UPI0003B5E1A9
GTP cyclohydrolase subunit MoaA; K03639 molybdenum cofactor biosynthesis protein rbh
SCNpilot_cont_500_bf_scaffold_1400_26
Modestobacter multiseptatus, Modestobacter, Geodermatophilales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

21517..21723
DNA (207bp) protein (69aa)
Uncharacterized protein n=1 Tax=Modestobacter marinus (strain BC501) RepID=I4F1C0_MODMB
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCH89433.1}; TaxID=1144889 species="Bacteria; Actinobacteria; Geodermatophilales; Geodermatophilaceae; Modestobacter.;" source="Modestobacter marinus (strain BC501).;"
Displaying 26 items

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