ggKbase home page

SCNpilot_cont_500_bf_scaffold_1494

Search features with annotation key words

Displaying 22 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_500_bf_scaffold_1494_1
unknown

Not on your lists

797..1150
DNA (354bp) protein (118aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_1494_2
unknown

Not on your lists

1154..1567
DNA (414bp) protein (138aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_1494_3
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1564..2097
DNA (534bp) protein (178aa)
Uncharacterized protein n=1 Tax=Burkholderia pseudomallei MSHR305 RepID=S5NNF5_BURPE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EKS34473.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
SCNpilot_cont_500_bf_scaffold_1494_4
unknown

Not on your lists

2094..3719
DNA (1626bp) protein (542aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_1494_5
unknown

Not on your lists

3757..4473
DNA (717bp) protein (239aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_1494_6
unknown

Not on your lists

4470..5321
DNA (852bp) protein (284aa)
hypothetical protein n=1 Tax=Humibacter albus RepID=UPI0003B6EC11
SCNpilot_cont_500_bf_scaffold_1494_7
Actinotalea ferrariae, Actinotalea, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

5318..6364
DNA (1047bp) protein (349aa)
Uncharacterized protein n=1 Tax=Gordonia soli NBRC 108243 RepID=M0QMA9_9ACTO
Uncharacterized protein {ECO:0000313|EMBL:EYR62737.1}; TaxID=948458 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Actinotalea.;" source="Actinotalea ferrariae CF5-4.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_1494_8
Streptomyces sp. NTK 937, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(6492..6887)
DNA (396bp) protein (132aa)
type III restriction enzyme, res subunit; K01156 type III restriction enzyme [EC:3.1.21.5]
hypothetical protein n=1 Tax=Streptomyces sulphureus RepID=UPI000375BEB2
Uncharacterized protein {ECO:0000313|EMBL:KDQ68550.1}; TaxID=1487711 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. NTK 937.;"
SCNpilot_cont_500_bf_scaffold_1494_9
unknown

Not on your lists

7491..7862
DNA (372bp) protein (124aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_1494_10
unknown

Not on your lists

7891..8247
DNA (357bp) protein (119aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_1494_11
Streptomyces nanchangensis, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(9105..9773)
DNA (669bp) protein (223aa)
NanT3 n=1 Tax=Streptomyces nanchangensis RepID=Q7WTG0_9ACTO
NanT3 {ECO:0000313|EMBL:AAP42850.1}; TaxID=204925 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces nanchangensis.;"
Transcriptional regulator, LuxR family
SCNpilot_cont_500_bf_scaffold_1494_12
Kutzneria sp. 744, Kutzneria, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(9746..10852)
DNA (1107bp) protein (369aa)
hypothetical protein n=1 Tax=Actinokineospora enzanensis RepID=UPI000378E677
LigA protein {ECO:0000313|EMBL:EWM18420.1}; TaxID=345341 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Kutzneria.;" source="Kutzneria sp. 744.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_1494_13
Kibdelosporangium sp. MJ126-NF4, Kibdelosporangium, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(10840..11970)
DNA (1131bp) protein (377aa)
hypothetical protein n=1 Tax=Actinokineospora enzanensis RepID=UPI00036F1A62
Two-component system sensor kinase {ECO:0000313|EMBL:CEL16596.1}; TaxID=703222 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Kibdelosporangium.;" source="Kibdelosporangium sp. MJ126-NF4.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_1494_14
Frankia sp. BMG5.23, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

12198..13184
DNA (987bp) protein (329aa)
hypothetical protein n=1 Tax=Actinomycetospora chiangmaiensis RepID=UPI00036B3CFE
Uncharacterized protein {ECO:0000313|EMBL:KDA44539.1}; TaxID=683305 species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. BMG5.23.;"
SCNpilot_cont_500_bf_scaffold_1494_15
unknown

Not on your lists

comp(13364..13552)
DNA (189bp) protein (63aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_1494_16
Propionibacterium freudenreichii, Propionibacterium, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(13575..14372)
DNA (798bp) protein (266aa)
Uncharacterized protein {ECO:0000313|EMBL:CEG91136.1}; TaxID=1744 species="Bacteria; Actinobacteria; Propionibacteriales; Propionibacteriaceae; Propionibacterium.;" source="Propionibacterium freudenreichii.;"
hypothetical protein id=5802444 bin=PER_GWA2_38_35 species=PERA2_38_36 genus=PERA2_38_36 taxon_order=PERA2_38_36 taxon_class=PERA2_38_36 phylum=PER tax=PER_GWA2_38_35 organism_group=PER (Peregrinibacteria) organism_desc=This is the curated version (7 contigs can be represented as 5 scaffolds)
SCNpilot_cont_500_bf_scaffold_1494_17
Mycobacterium chubuense, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(14780..15730)
DNA (951bp) protein (317aa)
Transposase n=1 Tax=Mycobacterium chubuense (strain NBB4) RepID=I4BT29_MYCCN rbh
transposase rbh
Transposase {ECO:0000313|EMBL:AFM20436.1}; Flags: Precursor;; TaxID=710421 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium chubuense (strain NBB4).;"
SCNpilot_cont_500_bf_scaffold_1494_18
Mycobacterium kansasii, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

16048..16920
DNA (873bp) protein (291aa)
Type II site-specific deoxyribonuclease n=1 Tax=Rhodococcus wratislaviensis IFP 2016 RepID=L2TCL1_9NOCA
NgoMIV restriction enzyme family protein {ECO:0000313|EMBL:EUA15588.1}; TaxID=1299327 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium kansasii 732.;"
Type II site-specific deoxyribonuclease
SCNpilot_cont_500_bf_scaffold_1494_19
Actinokineospora spheciospongiae, Actinokineospora, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

17101..17481
DNA (381bp) protein (127aa)
DNA mismatch endonuclease Vsr; K07458 DNA mismatch endonuclease, patch repair protein [EC:3.1.-.-]
DNA mismatch endonuclease Vsr n=1 Tax=Actinosynnema mirum (strain ATCC 29888 / DSM 43827 / NBRC 14064 / IMRU 3971) RepID=C6WNT8_ACTMD
Very-short-patch mismatch repair endonuclease (G-T specific) {ECO:0000313|EMBL:EWC60057.1}; TaxID=909613 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Actinokineospora.;" source="Actinokineospora spheciospongiae.;"
SCNpilot_cont_500_bf_scaffold_1494_20
Saccharothrix espanaensis, Saccharothrix, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

17549..18727
DNA (1179bp) protein (393aa)
Cytosine-specific methyltransferase {ECO:0000256|RuleBase:RU000417}; EC=2.1.1.37 {ECO:0000256|RuleBase:RU000417};; TaxID=1179773 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Saccharothrix.;" source="Saccharothrix espanaensis (strain ATCC 51144 / DSM 44229 / JCM 9112 /; NBRC 15066 / NRRL 15764).;"
Cytosine-specific methyltransferase n=1 Tax=Saccharothrix espanaensis (strain ATCC 51144 / DSM 44229 / JCM 9112 / NBRC 15066 / NRRL 15764) RepID=K0JUT7_SACES rbh
DNA-cytosine methyltransferase rbh
SCNpilot_cont_500_bf_scaffold_1494_21
Micromonospora aurantiaca, Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(18771..19826)
DNA (1056bp) protein (352aa)
Type II site-specific deoxyribonuclease (EC:3.1.21.4) rbh
Type II site-specific deoxyribonuclease {ECO:0000313|EMBL:ADL45301.1}; EC=3.1.21.4 {ECO:0000313|EMBL:ADL45301.1};; TaxID=644283 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micromonospora.;" source="Micromonospora aurantiaca (strain ATCC 27029 / DSM 43813 / JCM 10878 /; NBRC 16125 / INA 9442).;"
Type II site-specific deoxyribonuclease n=1 Tax=Micromonospora aurantiaca (strain ATCC 27029 / DSM 43813 / JCM 10878 / NBRC 16125 / INA 9442) RepID=D9T0S6_MICAI rbh
SCNpilot_cont_500_bf_scaffold_1494_22
Bacillus azotoformans, Bacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

20229..20618
DNA (390bp) protein (130aa)
Uncharacterized protein n=1 Tax=Bacillus azotoformans LMG 9581 RepID=K6ECR8_BACAZ
Uncharacterized protein {ECO:0000313|EMBL:EKN71241.1}; TaxID=1131731 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus.;" source="Bacillus azotoformans LMG 9581.;"
hypothetical protein
Displaying 22 items

View Taxonomy