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SCNpilot_cont_500_bf_scaffold_4059

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Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_500_bf_scaffold_4059_1
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

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comp(1..1920)
DNA (1920bp) protein (640aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI000368581D
hypothetical protein; K02004 putative ABC transport system permease protein
Uncharacterized protein {ECO:0000313|EMBL:ACT96058.1}; Flags: Precursor;; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114).;"
SCNpilot_cont_500_bf_scaffold_4059_2
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(2079..2606)
DNA (528bp) protein (176aa)
5 nucleotidase deoxy cytosolic type C n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TK91_NIAKG
5' nucleotidase
5 nucleotidase deoxy cytosolic type C {ECO:0000313|EMBL:AEV96525.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
SCNpilot_cont_500_bf_scaffold_4059_3
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(2614..5577)
DNA (2964bp) protein (988aa)
Excinuclease ABC, A subunit n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TK90_NIAKG rbh
UvrABC system protein A {ECO:0000256|SAAS:SAAS00088996}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
excinuclease ABC subunit A; K03701 excinuclease ABC subunit A rbh
SCNpilot_cont_500_bf_scaffold_4059_4
Leptospira kmetyi, Leptospira, Spirochaetia, Spirochaetes, Bacteria

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5753..7294
DNA (1542bp) protein (514aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1049970 species="Bacteria; Spirochaetes; Leptospirales; Leptospiraceae; Leptospira.;" source="Leptospira kmetyi serovar Malaysia str. Bejo-Iso9.;"
hypothetical protein n=1 Tax=Flexithrix dorotheae RepID=UPI00036824F0 rbh
histidine kinase sensor protein
SCNpilot_cont_500_bf_scaffold_4059_5
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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7291..7704
DNA (414bp) protein (138aa)
Response regulator receiver protein n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PAQ8_CHIPD
response regulator receiver protein
Response regulator receiver protein {ECO:0000313|EMBL:ACU63022.1}; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM; 2034).;"
SCNpilot_cont_500_bf_scaffold_4059_6
unknown

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8387..8947
DNA (561bp) protein (187aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_4059_7
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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comp(9019..9906)
DNA (888bp) protein (296aa)
Uncharacterized protein n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PPC8_CHIPD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACU60564.1}; Flags: Precursor;; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM; 2034).;"
SCNpilot_cont_500_bf_scaffold_4059_8
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

10504..11736
DNA (1233bp) protein (411aa)
cystathionine gamma-lyase; K01760 cystathionine beta-lyase [EC:4.4.1.8] rbh
Cystathionine gamma-lyase {ECO:0000313|EMBL:AEV96520.1}; EC=4.4.1.1 {ECO:0000313|EMBL:AEV96520.1};; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
Cystathionine gamma-lyase n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TK86_NIAKG rbh
SCNpilot_cont_500_bf_scaffold_4059_9
Solitalea canadensis, Solitalea, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

11806..13143
DNA (1338bp) protein (446aa)
OAH/OAS sulfhydrylase n=1 Tax=Solitalea canadensis (strain ATCC 29591 / DSM 3403 / NBRC 15130 / NCIMB 12057 / USAM 9D) RepID=H8KNZ5_SOLCM rbh
OAH/OAS sulfhydrylase rbh
OAH/OAS sulfhydrylase {ECO:0000313|EMBL:AFD05517.1}; TaxID=929556 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Solitalea.;" source="Solitalea canadensis (strain ATCC 29591 / DSM 3403 / NBRC 15130 /; NCIMB 12057 / USAM 9D) (Flexibacter canadensis).;"
SCNpilot_cont_500_bf_scaffold_4059_10
Aphanocapsa montana, Aphanocapsa, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

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13155..14234
DNA (1080bp) protein (360aa)
Homoserine O-acetyltransferase {ECO:0000256|SAAS:SAAS00070949}; EC=2.3.1.- {ECO:0000256|SAAS:SAAS00276255};; EC=2.3.1.31 {ECO:0000256|SAAS:SAAS00070942};; TaxID=1574475 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Aphanocapsa.;" source="Aphanocapsa montana BDHKU210001.;"
homoserine O-acetyltransferase; K00641 homoserine O-acetyltransferase [EC:2.3.1.31]
homoserine O-acetyltransferase n=1 Tax=Niabella aurantiaca RepID=UPI00036D3ABF
SCNpilot_cont_500_bf_scaffold_4059_11
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

14519..15775
DNA (1257bp) protein (419aa)
homoserine dehydrogenase; K00003 homoserine dehydrogenase [EC:1.1.1.3] rbh
Homoserine dehydrogenase {ECO:0000256|RuleBase:RU000579}; EC=1.1.1.3 {ECO:0000256|RuleBase:RU000579};; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
Homoserine dehydrogenase n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TK84_NIAKG rbh
SCNpilot_cont_500_bf_scaffold_4059_12
Pantoea agglomerans, Pantoea, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16063..16653
DNA (591bp) protein (197aa)
transcriptional regulator n=1 Tax=Pantoea sp. SL1_M5 RepID=UPI0002553A79
Transcriptional regulator {ECO:0000313|EMBL:KDA93928.1}; TaxID=1408177 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Pantoea; Pantoea agglomerans group.;" source="Pantoea agglomerans Eh318.;"
dfoC; siderophore biosynthesis protein
SCNpilot_cont_500_bf_scaffold_4059_13
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(16626..17342)
DNA (717bp) protein (239aa)
Xenobiotic-transporting ATPase {ECO:0000313|EMBL:AEW03336.1}; EC=3.6.3.44 {ECO:0000313|EMBL:AEW03336.1};; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
Xenobiotic-transporting ATPase n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8T7P2_NIAKG
xenobiotic-transporting ATPase
Displaying 13 items

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