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SCNpilot_cont_500_bf_scaffold_4100

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Displaying 9 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_500_bf_scaffold_4100_1
Runella slithyformis, Runella, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

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comp(1..993)
DNA (993bp) protein (331aa)
AAA ATPase n=1 Tax=Runella slithyformis (strain ATCC 29530 / DSM 19594 / LMG 11500 / NCIMB 11436 / LSU 4) RepID=F8EL89_RUNSL rbh
AAA ATPase; K07133 rbh
AAA ATPase {ECO:0000313|EMBL:AEI51585.1}; TaxID=761193 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Runella.;" source="Runella slithyformis (strain ATCC 29530 / DSM 19594 / LMG 11500 /; NCIMB 11436 / LSU 4).;"
SCNpilot_cont_500_bf_scaffold_4100_2
Burkholderia cepacia, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(1131..2102)
DNA (972bp) protein (324aa)
Restriction endonuclease n=1 Tax=Ktedonobacter racemifer DSM 44963 RepID=D6U7A8_9CHLR
Restriction endonuclease family protein {ECO:0000313|EMBL:AIO43437.1}; TaxID=292 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia; Burkholderia cepacia complex.;" source="Burkholderia cepacia (Pseudomonas cepacia).;"
restriction endonuclease
SCNpilot_cont_500_bf_scaffold_4100_trna_1
unknown

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comp(2505..2576)
DNA (72bp)
transferRNA
SCNpilot_cont_500_bf_scaffold_4100_3
Ktedonobacter racemifer, Ktedonobacter, Ktedonobacterales, Ktedonobacteria, Chloroflexi, Bacteria

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comp(2672..3139)
DNA (468bp) protein (156aa)
Activator of Hsp90 ATPase 1 family protein n=1 Tax=Ktedonobacter racemifer DSM 44963 RepID=D6U3X2_9CHLR
Activator of Hsp90 ATPase 1 family protein {ECO:0000313|EMBL:EFH81210.1}; TaxID=485913 species="Bacteria; Chloroflexi; Ktedonobacteria; Ktedonobacterales; Ktedonobacteraceae; Ktedonobacter.;" source="Ktedonobacter racemifer DSM 44963.;"
activator of Hsp90 ATPase 1 family protein
SCNpilot_cont_500_bf_scaffold_4100_4
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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3348..4361
DNA (1014bp) protein (338aa)
glyceraldehyde-3-phosphate dehydrogenase (NAD+); K00134 glyceraldehyde 3-phosphate dehydrogenase [EC:1.2.1.12] rbh
Glyceraldehyde-3-phosphate dehydrogenase {ECO:0000256|RuleBase:RU361160}; EC=1.2.1.- {ECO:0000256|RuleBase:RU361160};; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
Glyceraldehyde-3-phosphate dehydrogenase (NAD+) n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TB39_NIAKG rbh
SCNpilot_cont_500_bf_scaffold_4100_5
Flavihumibacter petaseus, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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4422..5621
DNA (1200bp) protein (400aa)
Phosphoglycerate kinase {ECO:0000256|HAMAP-Rule:MF_00145, ECO:0000256|RuleBase:RU000532}; EC=2.7.2.3 {ECO:0000256|HAMAP-Rule:MF_00145, ECO:0000256|RuleBase:RU000532};; TaxID=1220578 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter petaseus NBRC 106054.;"
phosphoglycerate kinase; K00927 phosphoglycerate kinase [EC:2.7.2.3] rbh
Phosphoglycerate kinase n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TB38_NIAKG rbh
SCNpilot_cont_500_bf_scaffold_4100_6
Chlorobium sp. GBChlB, Chlorobium, Chlorobiales, Chlorobia, Chlorobi, Bacteria

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comp(5622..6614)
DNA (993bp) protein (331aa)
Zn-dependent alcohol dehydrogenase n=1 Tax=Solitalea canadensis (strain ATCC 29591 / DSM 3403 / NBRC 15130 / NCIMB 12057 / USAM 9D) RepID=H8KW17_SOLCM rbh
Alcohol dehydrogenase {ECO:0000313|EMBL:KER11153.1}; TaxID=1519464 species="Bacteria; Chlorobi; Chlorobia; Chlorobiales; Chlorobiaceae; Chlorobium/Pelodictyon group; Chlorobium.;" source="Chlorobium sp. GBChlB.;"
Zn-dependent alcohol dehydrogenase rbh
SCNpilot_cont_500_bf_scaffold_4100_7
Emticicia oligotrophica, Emticicia, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

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comp(6628..7986)
DNA (1359bp) protein (453aa)
Oxidoreductase domain protein n=1 Tax=Emticicia oligotrophica (strain DSM 17448 / GPTSA100-15) RepID=I2EUA5_EMTOG rbh
oxidoreductase domain protein rbh
Oxidoreductase domain protein {ECO:0000313|EMBL:AFK03258.1}; Flags: Precursor;; TaxID=929562 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Emticicia.;" source="Emticicia oligotrophica (strain DSM 17448 / GPTSA100-15).;"
SCNpilot_cont_500_bf_scaffold_4100_8
Pedobacter sp. V48, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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8051..8944
DNA (894bp) protein (298aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI000361ABBC
Uncharacterized protein {ECO:0000313|EMBL:ETZ22442.1}; TaxID=509635 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter sp. V48.;"
hypothetical protein
Displaying 9 items

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