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SCNpilot_cont_500_bf_scaffold_4266

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Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_500_bf_scaffold_4266_1
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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comp(156..776)
DNA (621bp) protein (207aa)
Recombination protein RecR n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8T7I8_NIAKG rbh
DNA replication and repair protein RecR; K06187 recombination protein RecR rbh
Recombination protein RecR {ECO:0000256|HAMAP-Rule:MF_00017, ECO:0000256|SAAS:SAAS00012243}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
SCNpilot_cont_500_bf_scaffold_4266_2
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(842..1600)
DNA (759bp) protein (253aa)
Uncharacterized protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8T7I7_NIAKG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEW02242.1}; Flags: Precursor;; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
SCNpilot_cont_500_bf_scaffold_4266_3
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(1773..2237)
DNA (465bp) protein (155aa)
Uncharacterized protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8T7I7_NIAKG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEW02242.1}; Flags: Precursor;; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
SCNpilot_cont_500_bf_scaffold_4266_4
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(2333..5443)
DNA (3111bp) protein (1037aa)
UvrD/REP helicase; K03657 DNA helicase II / ATP-dependent DNA helicase PcrA [EC:3.6.4.12] rbh
DNA helicase {ECO:0000256|SAAS:SAAS00145970}; EC=3.6.4.12 {ECO:0000256|SAAS:SAAS00145970};; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
UvrD/REP helicase n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8T7I6_NIAKG rbh
SCNpilot_cont_500_bf_scaffold_4266_5
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

5743..7104
DNA (1362bp) protein (454aa)
Putative two component, sigma54 specific, transcriptional regulator n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8T7I5_NIAKG rbh
putative two component sigma-54 specific transcriptional regulator rbh
Putative two component, sigma54 specific, transcriptional regulator {ECO:0000313|EMBL:AEW02240.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
SCNpilot_cont_500_bf_scaffold_4266_6
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

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7133..9514
DNA (2382bp) protein (794aa)
hypothetical protein n=1 Tax=Pontibacter roseus RepID=UPI000380D658 rbh
Hpt sensor hybrid histidine kinase rbh
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
SCNpilot_cont_500_bf_scaffold_4266_7
Cytophaga hutchinsonii, Cytophaga, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

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9737..10120
DNA (384bp) protein (128aa)
Response regulator of Zn/Pb responsive two-component regulatory system n=1 Tax=Cytophaga hutchinsonii (strain ATCC 33406 / NCIMB 9469) RepID=Q11R36_CYTH3
zraR; response regulator of Zn/Pb responsive two-component regulatory system
Response regulator of Zn/Pb responsive two-component regulatory system {ECO:0000313|EMBL:ABG60128.1}; TaxID=269798 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Cytophaga.;" source="Cytophaga hutchinsonii (strain ATCC 33406 / NCIMB 9469).;"
SCNpilot_cont_500_bf_scaffold_4266_8
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(10288..10923)
DNA (636bp) protein (212aa)
Uncharacterized protein n=1 Tax=Flavobacterium sp. F52 RepID=J1AJR4_9FLAO
Uncharacterized protein {ECO:0000313|EMBL:KIC94624.1}; TaxID=1349421 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter solisilvae.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_4266_9
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(10984..11634)
DNA (651bp) protein (217aa)
hypothetical protein n=1 Tax=Niabella aurantiaca RepID=UPI000362CBD4 rbh
Uncharacterized protein {ECO:0000313|EMBL:KIC95991.1}; TaxID=1349421 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter solisilvae.;"
hypothetical protein rbh
SCNpilot_cont_500_bf_scaffold_4266_10
unknown

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12068..12313
DNA (246bp) protein (82aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_4266_trna_1
unknown

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12567..12638
DNA (72bp)
transferRNA
SCNpilot_cont_500_bf_scaffold_4266_11
RIFCSPLOWO2_12_FULL_Bacteroidetes_35_15_curated, Bacteroidetes, Bacteria

Not on your lists

comp(12601..14205)
DNA (1605bp) protein (535aa)
Putative bacteriophage resolvase/recombinase n=1 Tax=Nonlabens dokdonensis (strain DSM 17205 / KCTC 12402 / DSW-6) RepID=L7W903_NONDD rbh
putative bacteriophage resolvase/recombinase rbh
Tax=RIFCSPLOWO2_12_FULL_Bacteroidetes_35_15_curated
SCNpilot_cont_500_bf_scaffold_4266_12
unknown

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comp(14495..15430)
DNA (936bp) protein (312aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_4266_13
unknown

Not on your lists

comp(15908..16753)
DNA (846bp) protein (282aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_4266_14
unknown

Not on your lists

comp(16840..17514)
DNA (675bp) protein (225aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_4266_15
unknown

Not on your lists

comp(17571..18044)
DNA (474bp) protein (158aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_4266_16
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

18643..18909
DNA (267bp) protein (89aa)
Uncharacterized protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TQX6_NIAKG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEV97875.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
SCNpilot_cont_500_bf_scaffold_4266_17
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

19383..20234
DNA (852bp) protein (284aa)
Suppressor of fused protein (SUFU) n=1 Tax=Flavobacterium sp. CF136 RepID=J2SEK5_9FLAO
Uncharacterized protein {ECO:0000313|EMBL:KIC95950.1}; TaxID=1349421 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter solisilvae.;"
hypothetical protein
Displaying 18 items

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