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SCNpilot_cont_500_bf_scaffold_4720

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Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_500_bf_scaffold_4720_1
unknown

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2..319
DNA (318bp) protein (106aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_4720_2
Prevotella oris, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(239..1597)
DNA (1359bp) protein (453aa)
Outer membrane protein n=1 Tax=Prevotella oris C735 RepID=D7NF57_9BACT
Outer membrane protein {ECO:0000313|EMBL:EFI47904.1}; TaxID=563008 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella.;" source="Prevotella oris C735.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_4720_3
Pedobacter sp. NL19, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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comp(1585..2157)
DNA (573bp) protein (191aa)
TonB-denpendent receptor n=1 Tax=Spirosoma panaciterrae RepID=UPI000361F324
Contig5, whole genome shotgun sequence {ECO:0000313|EMBL:KIO78917.1}; TaxID=1503925 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter sp. NL19.;"
TonB-dependent receptor plug
SCNpilot_cont_500_bf_scaffold_4720_4
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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comp(2289..3824)
DNA (1536bp) protein (512aa)
Histidine kinase n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8T9F2_NIAKG
histidine kinase
Histidine kinase {ECO:0000313|EMBL:AEV99142.1}; Flags: Precursor;; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
SCNpilot_cont_500_bf_scaffold_4720_5
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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comp(3842..6313)
DNA (2472bp) protein (824aa)
Histidine kinase n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8T9F2_NIAKG rbh
histidine kinase rbh
Histidine kinase {ECO:0000313|EMBL:AEV99142.1}; Flags: Precursor;; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
SCNpilot_cont_500_bf_scaffold_4720_6
Flammeovirgaceae bacterium 311, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

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6489..8873
DNA (2385bp) protein (795aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI000372CBE2 rbh
Uncharacterized protein {ECO:0000313|EMBL:AHM62856.1}; TaxID=1257021 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Flammeovirgaceae; unclassified Flammeovirgaceae.;" source="Flammeovirgaceae bacterium 311.;"
acidobacterial duplicated orphan (ADOP) ABC-type permease-like protein rbh
SCNpilot_cont_500_bf_scaffold_4720_7
GWF2_RIF_IGX_33_9_curated, RIF-IGX, Bacteria

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comp(8875..9333)
DNA (459bp) protein (153aa)
Putative hydroxylaminobenzene mutase id=4440589 bin=GWF2_Ignavibacteria_33_9 species=Indibacter alkaliphilus genus=Indibacter taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=GWF2_Ignavibacteria_33_9 organism_group=Ignavibacteria
Putative hydroxylaminobenzene mutase
Tax=GWF2_RIF_IGX_33_9_curated
SCNpilot_cont_500_bf_scaffold_4720_8
unknown

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9518..10573
DNA (1056bp) protein (352aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_4720_9
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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10666..11550
DNA (885bp) protein (295aa)
Transcriptional regulator, AraC family n=1 Tax=Haliscomenobacter hydrossis (strain ATCC 27775 / DSM 1100 / LMG 10767 / O) RepID=F4KZF5_HALH1 rbh
Transcriptional regulator {ECO:0000313|EMBL:KIC95917.1}; TaxID=1349421 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter solisilvae.;"
AraC family transcriptional regulator rbh
SCNpilot_cont_500_bf_scaffold_4720_10
Flavihumibacter sp. ZG627, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

11636..12166
DNA (531bp) protein (177aa)
putative acyltransferase (EC:2.3.1.-)
Acetyltransferase (Isoleucine patch superfamily) n=1 Tax=Flavobacterium sp. CF136 RepID=J2S9H7_9FLAO
Acetyltransferase {ECO:0000313|EMBL:KIC90499.1}; TaxID=1463156 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter sp. ZG627.;"
SCNpilot_cont_500_bf_scaffold_4720_11
unknown

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12384..13460
DNA (1077bp) protein (359aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_4720_12
Mariniradius saccharolyticus, Mariniradius, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

13728..14486
DNA (759bp) protein (253aa)
hypothetical protein n=1 Tax=Niabella aurantiaca RepID=UPI0003756070
GGDEF domain protein {ECO:0000313|EMBL:EMS33530.1}; TaxID=1239962 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cyclobacteriaceae; Mariniradius.;" source="Mariniradius saccharolyticus AK6.;"
hypothetical protein
Displaying 12 items

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