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SCNpilot_cont_500_bf_scaffold_5057

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Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_500_bf_scaffold_5057_1
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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1..2322
DNA (2322bp) protein (774aa)
PKD domain containing protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8THB8_NIAKG rbh
PKD domain-containing protein rbh
PKD domain containing protein {ECO:0000313|EMBL:AEW01728.1}; Flags: Precursor;; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
SCNpilot_cont_500_bf_scaffold_5057_2
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

2375..3379
DNA (1005bp) protein (335aa)
Putative membrane protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8THB9_NIAKG rbh
hypothetical protein rbh
Putative membrane protein {ECO:0000313|EMBL:AEW01729.1}; Flags: Precursor;; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
SCNpilot_cont_500_bf_scaffold_5057_3
Spirosoma radiotolerans, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

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3436..3909
DNA (474bp) protein (158aa)
Alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen n=1 Tax=Spirosoma linguale (strain ATCC 33905 / DSM 74 / LMG 10896) RepID=D2QP27_SPILD
Peroxiredoxin {ECO:0000313|EMBL:AKD55223.1}; TaxID=1379870 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma radiotolerans.;"
alkyl hydroperoxide reductase/thiol specific antioxidant/Mal allergen
SCNpilot_cont_500_bf_scaffold_5057_4
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

4031..4369
DNA (339bp) protein (113aa)
Uncharacterized protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8THC3_NIAKG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEW01733.1}; Flags: Precursor;; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
SCNpilot_cont_500_bf_scaffold_5057_5
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(4405..5463)
DNA (1059bp) protein (353aa)
PUA domain containing protein; K06969 23S rRNA (cytosine1962-C5)-methyltransferase [EC:2.1.1.191] rbh
PUA domain containing protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8THC4_NIAKG rbh
PUA domain containing protein {ECO:0000313|EMBL:AEW01734.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
SCNpilot_cont_500_bf_scaffold_5057_6
Hymenobacter swuensis, Hymenobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

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comp(5574..7025)
DNA (1452bp) protein (484aa)
glycoside hydrolase; K01201 glucosylceramidase [EC:3.2.1.45] rbh
glucosylceramidase n=1 Tax=Hymenobacter norwichensis RepID=UPI0003B44506 rbh
O-glycosyl hydrolase {ECO:0000313|EMBL:AHJ97423.1}; TaxID=1227739 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Hymenobacter.;" source="Hymenobacter swuensis DY53.;"
SCNpilot_cont_500_bf_scaffold_5057_7
BJP_08E140C01_Flavobacteriales_35_8, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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comp(7035..8231)
DNA (1197bp) protein (399aa)
Glycoside hydrolase family 16 n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T120_PALPW rbh
glycoside hydrolase family protein rbh
Tax=BJP_08E140C01_Flavobacteriales_35_8
SCNpilot_cont_500_bf_scaffold_5057_8
Flavihumibacter petaseus, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(8234..9079)
DNA (846bp) protein (282aa)
hypothetical protein n=1 Tax=Nafulsella turpanensis RepID=UPI00036BEC3F
Uncharacterized protein {ECO:0000313|EMBL:GAO42221.1}; TaxID=1220578 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter petaseus NBRC 106054.;"
glycosyl hydrolases family 16
SCNpilot_cont_500_bf_scaffold_5057_9
BJP_IG2103_Bacteroidetes_37_22, Bacteroidetes, Bacteria

Not on your lists

comp(9136..9933)
DNA (798bp) protein (266aa)
carbohydrate-binding protein SusD n=1 Tax=Cytophagales str. B6 RepID=UPI0003B6F02C rbh
RagB/SusD family protein
Tax=BJP_IG2103_Bacteroidetes_37_22
SCNpilot_cont_500_bf_scaffold_5057_10
Pontibacter korlensis, Pontibacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

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comp(9965..10573)
DNA (609bp) protein (203aa)
carbohydrate-binding protein SusD n=1 Tax=Cytophagales str. B6 RepID=UPI0003B6F02C
Carbohydrate-binding protein SusD {ECO:0000313|EMBL:AKD01970.1}; TaxID=400092 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Pontibacter.;" source="Pontibacter korlensis.;"
RagB/SusD family protein
SCNpilot_cont_500_bf_scaffold_5057_11
Pontibacter korlensis, Pontibacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(10593..14021)
DNA (3429bp) protein (1143aa)
hypothetical protein n=1 Tax=Dyadobacter beijingensis RepID=UPI00037C83C5 rbh
TonB-dependent receptor {ECO:0000313|EMBL:AKD05429.1}; TaxID=400092 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Pontibacter.;" source="Pontibacter korlensis.;"
SusC/RagA family TonB-linked outer membrane protein rbh
SCNpilot_cont_500_bf_scaffold_5057_12
Fibrisoma limi, Fibrisoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(14087..14992)
DNA (906bp) protein (302aa)
Anti-FecI sigma factor, FecR n=1 Tax=Fibrisoma limi BUZ 3 RepID=I2GBD4_9BACT
Anti-FecI sigma factor, FecR {ECO:0000313|EMBL:CCH51208.1}; TaxID=1185876 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Fibrisoma.;" source="Fibrisoma limi BUZ 3.;"
anti-FecI sigma factor FecR
SCNpilot_cont_500_bf_scaffold_5057_13
Pedobacter heparinus, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(15118..15714)
DNA (597bp) protein (199aa)
hypothetical protein n=1 Tax=Flexithrix dorotheae RepID=UPI0003613E1B
sigma-70 family RNA polymerase sigma factor
RNA polymerase sigma factor, sigma-70 family {ECO:0000313|EMBL:ACU02286.1}; TaxID=485917 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter heparinus (strain ATCC 13125 / DSM 2366 / NCIB 9290).;"
SCNpilot_cont_500_bf_scaffold_5057_14
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

15885..16436
DNA (552bp) protein (184aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI0003827B0B
GrpE protein HSP-70 cofactor; K03687 molecular chaperone GrpE
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
SCNpilot_cont_500_bf_scaffold_5057_15
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

16475..17632
DNA (1158bp) protein (386aa)
molecular chaperone DnaJ n=1 Tax=Niabella aurantiaca RepID=UPI0003815FD7 rbh
Chaperone protein DnaJ {ECO:0000256|HAMAP-Rule:MF_01152, ECO:0000256|SAAS:SAAS00053159}; TaxID=1349421 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter solisilvae.;"
chaperone protein dnaJ; K03686 molecular chaperone DnaJ rbh
SCNpilot_cont_500_bf_scaffold_5057_16
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(17653..18633)
DNA (981bp) protein (327aa)
von Willebrand factor type A n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TIC4_NIAKG
von Willebrand factor type A
von Willebrand factor type A {ECO:0000313|EMBL:AEW01740.1}; Flags: Precursor;; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
SCNpilot_cont_500_bf_scaffold_5057_17
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(18630..19364)
DNA (735bp) protein (245aa)
von Willebrand factor type A n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TIC4_NIAKG
von Willebrand factor type A
von Willebrand factor type A {ECO:0000313|EMBL:AEW01740.1}; Flags: Precursor;; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
SCNpilot_cont_500_bf_scaffold_5057_18
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(19471..19965)
DNA (495bp) protein (165aa)
hypoxanthine phosphoribosyltransferase; K00760 hypoxanthine phosphoribosyltransferase [EC:2.4.2.8]
Hypoxanthine phosphoribosyltransferase {ECO:0000313|EMBL:AEW01741.1}; EC=2.4.2.8 {ECO:0000313|EMBL:AEW01741.1};; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
Hypoxanthine phosphoribosyltransferase n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TIC5_NIAKG
Displaying 18 items

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