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SCNpilot_cont_500_bf_scaffold_5602

Search features with annotation key words

Displaying 24 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_500_bf_scaffold_5602_1
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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1..855
DNA (855bp) protein (285aa)
Uncharacterized protein n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PBJ4_CHIPD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACU63058.1}; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM; 2034).;"
SCNpilot_cont_500_bf_scaffold_5602_2
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

881..2350
DNA (1470bp) protein (490aa)
Uncharacterized protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TCD5_NIAKG
hypothetical protein; K02004 putative ABC transport system permease protein
Uncharacterized protein {ECO:0000313|EMBL:AEW01442.1}; Flags: Precursor;; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
SCNpilot_cont_500_bf_scaffold_5602_3
unknown

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comp(2205..3161)
DNA (957bp) protein (319aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_5602_4
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

3226..3444
DNA (219bp) protein (73aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI0003776EF7
erythromycin esterase
Erythromycin esterase {ECO:0000313|EMBL:AEW02387.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
SCNpilot_cont_500_bf_scaffold_5602_5
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(3441..4079)
DNA (639bp) protein (213aa)
Haloacid dehalogenase domain protein hydrolase n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PUR2_CHIPD
haloacid dehalogenase; K07025 putative hydrolase of the HAD superfamily
Haloacid dehalogenase domain protein hydrolase {ECO:0000313|EMBL:ACU61060.1}; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM; 2034).;"
SCNpilot_cont_500_bf_scaffold_5602_6
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(4099..5565)
DNA (1467bp) protein (489aa)
Transcriptional regulator, GntR family with aminotransferase domain n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TI46_NIAKG rbh
DeoR family transcriptional regulator; K00375 GntR family transcriptional regulator / MocR family aminotransferase rbh
Transcriptional regulator, GntR family with aminotransferase domain {ECO:0000313|EMBL:AEV99649.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
SCNpilot_cont_500_bf_scaffold_5602_7
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

5657..6088
DNA (432bp) protein (144aa)
Alkyl hydroperoxide reductase AhpD {ECO:0000256|SAAS:SAAS00088523}; EC=1.11.1.15 {ECO:0000256|SAAS:SAAS00088503};; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
Alkylhydroperoxidase like protein, AhpD family n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TI47_NIAKG
alkylhydroperoxidase
SCNpilot_cont_500_bf_scaffold_5602_8
Chryseobacterium indologenes, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

6110..6922
DNA (813bp) protein (271aa)
Uncharacterized protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TI48_NIAKG rbh
Uncharacterized protein {ECO:0000313|EMBL:GAE65275.1}; TaxID=1218103 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium indologenes NBRC 14944.;"
hypothetical protein rbh
SCNpilot_cont_500_bf_scaffold_5602_9
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(6942..7745)
DNA (804bp) protein (268aa)
Uncharacterized protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TB63_NIAKG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEW02446.1}; Flags: Precursor;; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
SCNpilot_cont_500_bf_scaffold_5602_10
Achromobacter xylosoxidans, Achromobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7813..8049)
DNA (237bp) protein (79aa)
UPI0003D687AB related cluster n=1 Tax=unknown RepID=UPI0003D687AB
Uncharacterised protein {ECO:0000313|EMBL:CKH94316.1}; TaxID=85698 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Achromobacter.;" source="Alcaligenes xylosoxydans xylosoxydans (Achromobacter xylosoxidans).;"
TolA protein
SCNpilot_cont_500_bf_scaffold_5602_11
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(8118..10031)
DNA (1914bp) protein (638aa)
Uncharacterized protein n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PGF1_CHIPD rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:ACU59883.1}; Flags: Precursor;; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM; 2034).;"
SCNpilot_cont_500_bf_scaffold_5602_12
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(10019..10822)
DNA (804bp) protein (268aa)
Uncharacterized protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TJ67_NIAKG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEV98600.1}; Flags: Precursor;; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
SCNpilot_cont_500_bf_scaffold_5602_13
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(10843..11253)
DNA (411bp) protein (137aa)
Uncharacterized protein n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PGF1_CHIPD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACU59883.1}; Flags: Precursor;; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM; 2034).;"
SCNpilot_cont_500_bf_scaffold_5602_14
RBG_16_Ignavibacteria_36_9_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

comp(11324..12088)
DNA (765bp) protein (255aa)
Uncharacterized protein n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PDP1_CHIPD
hypothetical protein
Tax=RBG_16_Ignavibacteria_36_9_curated
SCNpilot_cont_500_bf_scaffold_5602_15
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(12103..12324)
DNA (222bp) protein (74aa)
Putative uncharacterized protein n=1 Tax=Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114) RepID=C6VRW6_DYAFD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACT94487.1}; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114).;"
SCNpilot_cont_500_bf_scaffold_5602_16
Spirosoma linguale, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

12356..13456
DNA (1101bp) protein (367aa)
glycerate kinase (EC:2.7.1.31); K00865 glycerate kinase [EC:2.7.1.31]
Glycerate kinase {ECO:0000313|EMBL:ADB37971.1}; EC=2.7.1.31 {ECO:0000313|EMBL:ADB37971.1};; Flags: Precursor;; TaxID=504472 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma linguale (strain ATCC 33905 / DSM 74 / LMG 10896).;"
Glycerate kinase n=1 Tax=Spirosoma linguale (strain ATCC 33905 / DSM 74 / LMG 10896) RepID=D2QBU2_SPILD
SCNpilot_cont_500_bf_scaffold_5602_17
Pseudogulbenkiania ferrooxidans, Pseudogulbenkiania, Neisseriales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13633..13998
DNA (366bp) protein (122aa)
3-demethylubiquinone-9 3-methyltransferase n=1 Tax=Pseudogulbenkiania ferrooxidans 2002 RepID=B9Z1C9_9NEIS
3-demethylubiquinone-9 3-methyltransferase {ECO:0000313|EMBL:EEG09224.1}; TaxID=279714 species="Bacteria; Proteobacteria; Betaproteobacteria; Neisseriales; Chromobacteriaceae; Pseudogulbenkiania.;" source="Pseudogulbenkiania ferrooxidans 2002.;"
3-demethylubiquinone-9 3-methyltransferase
SCNpilot_cont_500_bf_scaffold_5602_18
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

14007..15053
DNA (1047bp) protein (349aa)
Uncharacterized protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8THY3_NIAKG rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:AEV98578.1}; Flags: Precursor;; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
SCNpilot_cont_500_bf_scaffold_5602_19
Sporocytophaga myxococcoides, Sporocytophaga, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

15342..15722
DNA (381bp) protein (127aa)
Putative uncharacterized protein n=1 Tax=Cytophaga hutchinsonii (strain ATCC 33406 / NCIMB 9469) RepID=Q11V69_CYTH3
PF08818 domain protein {ECO:0000313|EMBL:GAL85630.1}; TaxID=153721 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Sporocytophaga.;" source="Sporocytophaga myxococcoides.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_5602_20
Lysobacter capsici, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15695..16252
DNA (558bp) protein (186aa)
Uncharacterized protein n=1 Tax=Polaromonas sp. (strain JS666 / ATCC BAA-500) RepID=Q12B12_POLSJ
Uncharacterized protein {ECO:0000313|EMBL:EYR68396.1}; TaxID=1444315 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter capsici AZ78.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_5602_21
Spirosoma linguale, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(16242..18692)
DNA (2451bp) protein (817aa)
Tetratricopeptide TPR_2 repeat protein n=1 Tax=Spirosoma linguale (strain ATCC 33905 / DSM 74 / LMG 10896) RepID=D2QG44_SPILD
hypothetical protein
Tetratricopeptide TPR_2 repeat protein {ECO:0000313|EMBL:ADB36651.1}; TaxID=504472 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma linguale (strain ATCC 33905 / DSM 74 / LMG 10896).;"
SCNpilot_cont_500_bf_scaffold_5602_22
Spirosoma linguale, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(18689..19231)
DNA (543bp) protein (181aa)
ATPase associated with various cellular activities AAA_5 n=1 Tax=Spirosoma linguale (strain ATCC 33905 / DSM 74 / LMG 10896) RepID=D2QG43_SPILD
ATPase AAA
ATPase associated with various cellular activities AAA_5 {ECO:0000313|EMBL:ADB36650.1}; TaxID=504472 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma linguale (strain ATCC 33905 / DSM 74 / LMG 10896).;"
SCNpilot_cont_500_bf_scaffold_5602_23
GWE2_Bacteroidetes_40_63_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

19603..20682
DNA (1080bp) protein (360aa)
electron transporter RnfD n=1 Tax=Cytophagales str. B6 RepID=UPI0003B7B2CF rbh
electron transport complex, rnfABCdge type, d subunit rbh
Tax=GWE2_Bacteroidetes_40_63_curated
SCNpilot_cont_500_bf_scaffold_5602_24
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(20686..21822)
DNA (1137bp) protein (379aa)
Peptidase dimerization domain protein n=1 Tax=Emticicia oligotrophica (strain DSM 17448 / GPTSA100-15) RepID=I2ER18_EMTOG
peptidase dimerization domain protein
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
Displaying 24 items

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