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SCNpilot_cont_500_bf_scaffold_5638

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Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_500_bf_scaffold_5638_1
unknown

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comp(3..158)
DNA (156bp) protein (52aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_5638_2
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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comp(244..1905)
DNA (1662bp) protein (554aa)
Tetratricopeptide TPR_1 repeat-containing protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TBF3_NIAKG rbh
hypothetical protein rbh
Tetratricopeptide TPR_1 repeat-containing protein {ECO:0000313|EMBL:AEW03453.1}; Flags: Precursor;; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
SCNpilot_cont_500_bf_scaffold_5638_3
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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2015..2710
DNA (696bp) protein (232aa)
Two component transcriptional regulator, winged helix family n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TBF2_NIAKG rbh
two component transcriptional regulator, winged helix family rbh
Two component transcriptional regulator, winged helix family {ECO:0000313|EMBL:AEW03452.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
SCNpilot_cont_500_bf_scaffold_5638_4
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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2710..3339
DNA (630bp) protein (210aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; Flags: Precursor;; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
Integral membrane sensor signal transduction histidine kinase n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TBF1_NIAKG
integral membrane sensor signal transduction histidine kinase
SCNpilot_cont_500_bf_scaffold_5638_5
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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3440..4039
DNA (600bp) protein (200aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; Flags: Precursor;; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI000378DE64
integral membrane sensor signal transduction histidine kinase
SCNpilot_cont_500_bf_scaffold_5638_6
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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4087..4950
DNA (864bp) protein (288aa)
OmpA/MotB domain protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TCG8_NIAKG rbh
OmpA/MotB domain-containing protein; K02557 chemotaxis protein MotB rbh
OmpA/MotB domain protein {ECO:0000313|EMBL:AEW02508.1}; Flags: Precursor;; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
SCNpilot_cont_500_bf_scaffold_5638_7
GWF2_Bacteroidetes_33_38_curated, Bacteroidia, Bacteroidetes, Bacteria

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comp(5137..6036)
DNA (900bp) protein (300aa)
OmpA/MotB domain protein id=4190398 bin=GWF2_Bacteroidetes_33_38 species=unknown genus=Krokinobacter taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_33_38 organism_group=Bacteroidetes organism_desc=a699
outer membrane protein/peptidoglycan-associated (lipo)protein
Tax=GWF2_Bacteroidetes_33_38_curated
SCNpilot_cont_500_bf_scaffold_5638_8
RIFCSPLOWO2_12_FULL_Bacteroidetes_35_15_curated, Bacteroidetes, Bacteria

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comp(6060..7043)
DNA (984bp) protein (328aa)
OmpA/MotB domain protein n=1 Tax=Krokinobacter sp. (strain 4H-3-7-5) RepID=F4B2A6_KROS4
OmpA/MotB domain-containing protein
Tax=RIFCSPLOWO2_12_FULL_Bacteroidetes_35_15_curated
SCNpilot_cont_500_bf_scaffold_5638_9
Flavihumibacter petaseus, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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comp(7033..8370)
DNA (1338bp) protein (446aa)
TldD protein n=1 Tax=Rudanella lutea RepID=UPI00036EA059
Peptidase U62 family protein {ECO:0000313|EMBL:GAO41502.1}; TaxID=1220578 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter petaseus NBRC 106054.;"
peptidase u62 modulator of DNA gyrase
SCNpilot_cont_500_bf_scaffold_5638_10
Pedobacter antarcticus, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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comp(8429..10021)
DNA (1593bp) protein (531aa)
Peptidase U62 modulator of DNA gyrase n=1 Tax=Spirosoma linguale (strain ATCC 33905 / DSM 74 / LMG 10896) RepID=D2QM26_SPILD
TldD protein {ECO:0000313|EMBL:KEQ28493.1}; TaxID=1358423 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter antarcticus 4BY.;"
peptidase U62 modulator of DNA gyrase; K03568 TldD protein
SCNpilot_cont_500_bf_scaffold_5638_11
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

10183..10404
DNA (222bp) protein (74aa)
Iron sulfur domain-containing, CDGSH-type n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TDX4_NIAKG
CDGSH-type iron sulfur domain-containing protein
Iron sulfur domain-containing, CDGSH-type {ECO:0000313|EMBL:AEW02608.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
SCNpilot_cont_500_bf_scaffold_5638_12
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

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10415..12631
DNA (2217bp) protein (739aa)
peptidase S9 n=1 Tax=Spirosoma panaciterrae RepID=UPI0003735FFF rbh
peptidase S9B dipeptidylpeptidase IV domain-containing protein rbh
Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
SCNpilot_cont_500_bf_scaffold_5638_13

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comp(12639..13343)
DNA (705bp) protein (235aa)
Two-component system response regulator protein n=1 Tax=uncultured bacterium BLR12 RepID=C0INH2_9BACT rbh
Two-component system response regulator protein {ECO:0000313|EMBL:ACN58858.1}; TaxID=506514 species="Bacteria; environmental samples.;" source="uncultured bacterium BLR12.;"
two component transcriptional regulator, LytTR family protein
SCNpilot_cont_500_bf_scaffold_5638_14

Not on your lists

comp(13340..14494)
DNA (1155bp) protein (385aa)
Putative two-component system sensor protein n=1 Tax=uncultured bacterium BLR12 RepID=C0INH3_9BACT rbh
Putative two-component system sensor protein {ECO:0000313|EMBL:ACN58859.1}; TaxID=506514 species="Bacteria; environmental samples.;" source="uncultured bacterium BLR12.;"
signal transduction histidine kinase
SCNpilot_cont_500_bf_scaffold_5638_15
Chondromyces apiculatus, Chondromyces, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(14609..15433)
DNA (825bp) protein (275aa)
hypothetical protein n=1 Tax=Flexithrix dorotheae RepID=UPI000376BF8F
Glucoamylase {ECO:0000313|EMBL:EYF06372.1}; TaxID=1192034 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Chondromyces.;" source="Chondromyces apiculatus DSM 436.;"
glycosyl hydrolase family 15
Displaying 15 items

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