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SCNpilot_cont_500_bf_scaffold_5831

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Displaying 9 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_500_bf_scaffold_5831_1
Leptospira fainei, Leptospira, Spirochaetia, Spirochaetes, Bacteria

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comp(1..780)
DNA (780bp) protein (260aa)
Sigma-70 region 2 n=1 Tax=Leptospira fainei serovar Hurstbridge str. BUT 6 RepID=S3W578_9LEPT
Sigma-70 region 2 {ECO:0000313|EMBL:EPG75402.1}; TaxID=1193011 species="Bacteria; Spirochaetes; Leptospirales; Leptospiraceae; Leptospira.;" source="Leptospira fainei serovar Hurstbridge str. BUT 6.;"
sigma-70 family RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily
SCNpilot_cont_500_bf_scaffold_5831_2
Leptospira broomii, Leptospira, Spirochaetia, Spirochaetes, Bacteria

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comp(836..1177)
DNA (342bp) protein (114aa)
Uncharacterized protein n=1 Tax=Leptospira broomii serovar Hurstbridge str. 5399 RepID=T0GA28_9LEPT
Uncharacterized protein {ECO:0000313|EMBL:EQA43654.1}; TaxID=1049789 species="Bacteria; Spirochaetes; Leptospirales; Leptospiraceae; Leptospira.;" source="Leptospira broomii serovar Hurstbridge str. 5399.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_5831_3
Pedobacter sp. NL19, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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comp(1315..2004)
DNA (690bp) protein (230aa)
Uncharacterized protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TPN6_NIAKG rbh
Contig33, whole genome shotgun sequence {ECO:0000313|EMBL:KIO77533.1}; TaxID=1503925 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter sp. NL19.;"
hypothetical protein rbh
SCNpilot_cont_500_bf_scaffold_5831_4
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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comp(2009..2248)
DNA (240bp) protein (80aa)
Transcriptional regulator, HxlR family n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PPL0_CHIPD
HxlR family transcriptional regulator
Transcriptional regulator, HxlR family {ECO:0000313|EMBL:ACU62420.1}; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM; 2034).;"
SCNpilot_cont_500_bf_scaffold_5831_5
Zobellia galactanivorans, Zobellia, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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comp(2475..3227)
DNA (753bp) protein (251aa)
Two-component system-Response regulator n=1 Tax=Zobellia galactanivorans (strain DSM 12802 / CIP 106680 / NCIMB 13871 / Dsij) RepID=G0L1D8_ZOBGA
two-component system-response regulator
Two-component system-Response regulator {ECO:0000313|EMBL:CAZ94629.1}; TaxID=63186 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Zobellia.;" source="Zobellia galactanivorans (strain DSM 12802 / CIP 106680 / NCIMB 13871; / Dsij).;"
SCNpilot_cont_500_bf_scaffold_5831_6
Cellulophaga lytica, Cellulophaga, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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comp(3231..5060)
DNA (1830bp) protein (610aa)
Signal transduction histidine kinase, LytS n=1 Tax=Cellulophaga lytica (strain ATCC 23178 / DSM 7489 / JCM 8516 / NBRC 14961 / NCIMB 1423 / VKM B-1433 / Cy l20) RepID=F0RFG5_CELLC rbh
signal transduction histidine kinase LytS rbh
Signal transduction histidine kinase, LytS {ECO:0000313|EMBL:ADY27907.1}; TaxID=867900 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Cellulophaga.;" source="Cellulophaga lytica (strain ATCC 23178 / DSM 7489 / JCM 8516 / NBRC; 14961 / NCIMB 1423 / VKM B-1433 / Cy l20).;"
SCNpilot_cont_500_bf_scaffold_5831_7
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

5170..5799
DNA (630bp) protein (210aa)
Uncharacterized protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TEH5_NIAKG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEV99397.1}; Flags: Precursor;; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
SCNpilot_cont_500_bf_scaffold_5831_8
unknown

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5981..6439
DNA (459bp) protein (153aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_5831_9
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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comp(6471..6728)
DNA (258bp) protein (86aa)
Uncharacterized protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TG95_NIAKG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEW02734.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
Displaying 9 items

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