ggKbase home page

SCNpilot_cont_500_bf_scaffold_5844

Search features with annotation key words

Displaying 7 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_500_bf_scaffold_5844_1
Flavobacterium subsaxonicum, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

811..1206
DNA (396bp) protein (132aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI0003717D19
Mobilization protein {ECO:0000313|EMBL:KGO93645.1}; TaxID=1121898 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium subsaxonicum WB 4.1-42 = DSM 21790.;"
mobilisation protein
SCNpilot_cont_500_bf_scaffold_5844_2
GWF2_Bacteroidetes_43_11_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

1191..2480
DNA (1290bp) protein (430aa)
hypothetical protein n=1 Tax=Niabella aurantiaca RepID=UPI0003650480
relaxase/mobilization nuclease
Tax=GWF2_Bacteroidetes_43_11_curated
SCNpilot_cont_500_bf_scaffold_5844_3
Flavobacterium beibuense, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

2491..4473
DNA (1983bp) protein (661aa)
Type IV secretory pathway VirD4 components-like protein n=1 Tax=Zunongwangia profunda (strain DSM 18752 / CCTCC AB 206139 / SM-A87) RepID=D5BJN9_ZUNPS
type IV secretory pathway VirD4 components-like protein
Conjugal transfer protein TraG {ECO:0000313|EMBL:KGO80778.1}; TaxID=1406840 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium beibuense F44-8.;"
SCNpilot_cont_500_bf_scaffold_5844_4
unknown

Not on your lists

comp(4526..4702)
DNA (177bp) protein (59aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_5844_5

Not on your lists

5128..5622
DNA (495bp) protein (165aa)
hypothetical protein n=1 Tax=Spirosoma luteum RepID=UPI000366CAA5
Uncharacterized protein {ECO:0000313|EMBL:KKN78687.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_5844_6
Fibrella aestuarina, Fibrella, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(5668..6336)
DNA (669bp) protein (223aa)
Uncharacterized protein n=1 Tax=Fibrella aestuarina BUZ 2 RepID=I0KFF8_9BACT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCH02861.1}; TaxID=1166018 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Fibrella.;" source="Fibrella aestuarina BUZ 2.;"
SCNpilot_cont_500_bf_scaffold_5844_7
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(6336..6557)
DNA (222bp) protein (74aa)
Uncharacterized protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TAS6_NIAKG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEW00269.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
Displaying 7 items

View Taxonomy