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SCNpilot_cont_500_bf_scaffold_2016

Search features with annotation key words

Displaying 29 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_500_bf_scaffold_2016_1
Flavihumibacter sp. ZG627, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(1..1374)
DNA (1374bp) protein (458aa)
Putative outer membrane protein probably involved in nutrient binding n=1 Tax=Microscilla marina ATCC 23134 RepID=A1ZF02_9BACT
Uncharacterized protein {ECO:0000313|EMBL:KIC89719.1}; TaxID=1463156 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter sp. ZG627.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_2016_2
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

2520..3893
DNA (1374bp) protein (458aa)
DNA repair protein RadA n=1 Tax=Segetibacter koreensis RepID=UPI0003782CDF rbh
DNA repair protein RadA; K04485 DNA repair protein RadA/Sms rbh
DNA repair protein radA {ECO:0000256|RuleBase:RU003555}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
SCNpilot_cont_500_bf_scaffold_2016_3
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

3975..5378
DNA (1404bp) protein (468aa)
Uncharacterized protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TNU5_NIAKG rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:AEW02030.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
SCNpilot_cont_500_bf_scaffold_2016_4
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

5526..6044
DNA (519bp) protein (173aa)
peroxiredoxin; K00432 glutathione peroxidase [EC:1.11.1.9]
Glutathione peroxidase n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TNU6_NIAKG
Glutathione peroxidase {ECO:0000256|RuleBase:RU000499}; TaxID=1349421 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter solisilvae.;"
SCNpilot_cont_500_bf_scaffold_2016_5
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

6107..7267
DNA (1161bp) protein (387aa)
DNA polymerase III gamma/tau subunits-like protein; K02341 DNA polymerase III subunit delta' [EC:2.7.7.7] rbh
DNA polymerase III gamma/tau subunits-like protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TNU7_NIAKG rbh
DNA polymerase III gamma/tau subunits-like protein {ECO:0000313|EMBL:AEW02032.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
SCNpilot_cont_500_bf_scaffold_2016_6
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

7531..8823
DNA (1293bp) protein (431aa)
PSP1 domain protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TNU8_NIAKG rbh
PSP1 domain-containing protein rbh
PSP1 domain protein {ECO:0000313|EMBL:AEW02033.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
SCNpilot_cont_500_bf_scaffold_2016_7
Flavihumibacter petaseus, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

8901..9752
DNA (852bp) protein (284aa)
hypothetical protein n=1 Tax=Spirosoma spitsbergense RepID=UPI00036B5DA8
Putative hydrolase {ECO:0000313|EMBL:GAO41851.1}; TaxID=1220578 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter petaseus NBRC 106054.;"
alpha/beta hydrolase fold protein
SCNpilot_cont_500_bf_scaffold_2016_8
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

9865..10638
DNA (774bp) protein (258aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI00037AAAC7 rbh
hypothetical protein
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
SCNpilot_cont_500_bf_scaffold_2016_9
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(10674..11417)
DNA (744bp) protein (248aa)
Uncharacterized protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TNV0_NIAKG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEW02035.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
SCNpilot_cont_500_bf_scaffold_2016_10
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(11572..15153)
DNA (3582bp) protein (1194aa)
Acriflavin resistance protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TNV2_NIAKG rbh
Acriflavin resistance protein {ECO:0000313|EMBL:AEW02037.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
acriflavin resistance protein rbh
SCNpilot_cont_500_bf_scaffold_2016_11
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(15261..16016)
DNA (756bp) protein (252aa)
Efflux transporter, RND family, MFP subunit n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TNV3_NIAKG
RND transporter {ECO:0000313|EMBL:KIC96174.1}; TaxID=1349421 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter solisilvae.;"
RND family efflux transporter MFP subunit
SCNpilot_cont_500_bf_scaffold_2016_12
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(16418..17869)
DNA (1452bp) protein (484aa)
Outer membrane efflux protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TNV4_NIAKG rbh
outer membrane efflux protein rbh
Outer membrane efflux protein {ECO:0000313|EMBL:AEW02039.1}; Flags: Precursor;; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
SCNpilot_cont_500_bf_scaffold_2016_13
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(17853..18200)
DNA (348bp) protein (116aa)
Transcriptional regulator, TetR family n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TNV5_NIAKG
TetR family transcriptional regulator
Transcriptional regulator, TetR family {ECO:0000313|EMBL:AEW02040.1}; Flags: Precursor;; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
SCNpilot_cont_500_bf_scaffold_2016_14
Flavihumibacter petaseus, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(18190..18528)
DNA (339bp) protein (113aa)
hypothetical protein n=1 Tax=Cytophagales str. B6 RepID=UPI0003B5CBA0
Putative TetR family transcriptional regulator {ECO:0000313|EMBL:GAO41856.1}; TaxID=1220578 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter petaseus NBRC 106054.;"
TetR family transcriptional regulator
SCNpilot_cont_500_bf_scaffold_2016_15
Spirosoma linguale, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(18626..20317)
DNA (1692bp) protein (564aa)
Uncharacterized protein n=1 Tax=Spirosoma linguale (strain ATCC 33905 / DSM 74 / LMG 10896) RepID=D2QIY3_SPILD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADB36997.1}; Flags: Precursor;; TaxID=504472 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma linguale (strain ATCC 33905 / DSM 74 / LMG 10896).;"
SCNpilot_cont_500_bf_scaffold_2016_16
unknown

Not on your lists

20573..20749
DNA (177bp) protein (59aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_2016_17
unknown

Not on your lists

20951..21217
DNA (267bp) protein (89aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_2016_18
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

21376..22011
DNA (636bp) protein (212aa)
Uncharacterized protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TNV6_NIAKG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEW02041.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
SCNpilot_cont_500_bf_scaffold_2016_19
Chryseobacterium gleum, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(22135..22869)
DNA (735bp) protein (245aa)
Transcriptional regulator, AraC family n=1 Tax=Chryseobacterium gleum ATCC 35910 RepID=D7W585_9FLAO
Transcriptional regulator, AraC family {ECO:0000313|EMBL:EFK35274.1}; TaxID=525257 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium gleum ATCC 35910.;"
AraC family transcriptional regulator
SCNpilot_cont_500_bf_scaffold_2016_20
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

23223..24290
DNA (1068bp) protein (356aa)
Phosphoserine aminotransferase {ECO:0000256|HAMAP-Rule:MF_00160}; EC=2.6.1.52 {ECO:0000256|HAMAP-Rule:MF_00160, ECO:0000256|SAAS:SAAS00182444};; Phosphohydroxythreonine aminotransferase {ECO:0000256|HAMAP-Rule:MF_00160}; TaxID=1349421 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter solisilvae.;"
phosphoserine aminotransferase apoenzyme; K00831 phosphoserine aminotransferase [EC:2.6.1.52]
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI00036FB96E
SCNpilot_cont_500_bf_scaffold_2016_21
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

24296..25522
DNA (1227bp) protein (409aa)
Uncharacterized conserved protein UCP033563 n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TNV9_NIAKG rbh
hypothetical protein rbh
Uncharacterized conserved protein UCP033563 {ECO:0000313|EMBL:AEW02044.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
SCNpilot_cont_500_bf_scaffold_2016_22
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

25588..26610
DNA (1023bp) protein (341aa)
Tetratricopeptide TPR_2 repeat-containing protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TNW0_NIAKG rbh
hypothetical protein rbh
Tetratricopeptide TPR_2 repeat-containing protein {ECO:0000313|EMBL:AEW02045.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
SCNpilot_cont_500_bf_scaffold_2016_23
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

26665..28446
DNA (1782bp) protein (594aa)
Long-chain-fatty-acid--CoA ligase {ECO:0000313|EMBL:AEW02046.1}; EC=6.2.1.3 {ECO:0000313|EMBL:AEW02046.1};; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
Long-chain-fatty-acid--CoA ligase n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TNW1_NIAKG rbh
long-chain-fatty-acid--CoA ligase rbh
SCNpilot_cont_500_bf_scaffold_2016_24
Flavihumibacter sp. ZG627, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(28475..28906)
DNA (432bp) protein (144aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI0003686045
DoxX family protein {ECO:0000313|EMBL:KIC91444.1}; TaxID=1463156 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter sp. ZG627.;"
DoxX family protein
SCNpilot_cont_500_bf_scaffold_2016_25
Bacteroides graminisolvens, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(29065..29583)
DNA (519bp) protein (173aa)
Uncharacterized protein {ECO:0000313|EMBL:GAK38132.1}; TaxID=1121097 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides graminisolvens DSM 19988 = JCM 15093.;"
SCNpilot_cont_500_bf_scaffold_2016_26
RIFCSPLOWO2_12_FULL_Bacteroidetes_37_12_curated, Bacteroidetes, Bacteria

Not on your lists

comp(29638..30015)
DNA (378bp) protein (126aa)
Lactoylglutathione lyase family protein n=1 Tax=Flavobacterium sp. CF136 RepID=J3C9C6_9FLAO
Glyoxalase/bleomycin resistance protein/dioxygenase
Tax=RIFCSPLOWO2_12_FULL_Bacteroidetes_37_12_curated
SCNpilot_cont_500_bf_scaffold_2016_27
unknown

Not on your lists

comp(30132..30530)
DNA (399bp) protein (133aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_2016_28
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(30556..31992)
DNA (1437bp) protein (479aa)
Transcriptional regulator, GntR family with aminotransferase domain n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TEW4_NIAKG rbh
DeoR family transcriptional regulator rbh
Transcriptional regulator, GntR family with aminotransferase domain {ECO:0000313|EMBL:AEW01552.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
SCNpilot_cont_500_bf_scaffold_2016_29
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

32141..32530
DNA (390bp) protein (130aa)
Aromatic-L-amino-acid decarboxylase {ECO:0000313|EMBL:AEW02048.1}; EC=4.1.1.28 {ECO:0000313|EMBL:AEW02048.1};; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
Aromatic-L-amino-acid decarboxylase n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TNW3_NIAKG
aromatic-L-amino-acid decarboxylase
Displaying 29 items

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