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SCNpilot_cont_500_bf_scaffold_2327

Search features with annotation key words

Displaying 27 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_500_bf_scaffold_2327_1
Flavihumibacter sp. ZG627, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

3..1310
DNA (1308bp) protein (436aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI000376A1F2
Molecular chaperone Hsp90 {ECO:0000313|EMBL:KIC89397.1}; TaxID=1463156 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter sp. ZG627.;"
Heat shock protein Hsp90; K04079 molecular chaperone HtpG
SCNpilot_cont_500_bf_scaffold_2327_2
Flavihumibacter petaseus, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(1329..3044)
DNA (1716bp) protein (572aa)
exonuclease RecJ; K07462 single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI00037EE6FC
Single-stranded DNA-specific exonuclease RecJ {ECO:0000313|EMBL:GAO45688.1}; TaxID=1220578 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter petaseus NBRC 106054.;"
SCNpilot_cont_500_bf_scaffold_2327_3
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(3047..3868)
DNA (822bp) protein (274aa)
Trans-hexaprenyltranstransferase; K02523 octaprenyl-diphosphate synthase [EC:2.5.1.90]
Trans-hexaprenyltranstransferase {ECO:0000313|EMBL:AEW01353.1}; EC=2.5.1.30 {ECO:0000313|EMBL:AEW01353.1};; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
Trans-hexaprenyltranstransferase n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TB06_NIAKG
SCNpilot_cont_500_bf_scaffold_2327_4
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

4226..5890
DNA (1665bp) protein (555aa)
OmpA/MotB domain protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TB05_NIAKG rbh
Uncharacterized protein {ECO:0000313|EMBL:KIC91975.1}; TaxID=1349421 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter solisilvae.;"
OmpA/MotB domain-containing protein rbh
SCNpilot_cont_500_bf_scaffold_2327_5
Flavihumibacter sp. ZG627, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

5975..6790
DNA (816bp) protein (272aa)
Outer membrane assembly lipoprotein YfiO n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TB04_NIAKG rbh
Membrane protein {ECO:0000313|EMBL:KIC89393.1}; TaxID=1463156 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter sp. ZG627.;"
outer membrane assembly lipoprotein YfiO; K05807 putative lipoprotein rbh
SCNpilot_cont_500_bf_scaffold_2327_6
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

6765..7106
DNA (342bp) protein (114aa)
DNA-directed RNA polymerase, omega subunit n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TB03_NIAKG
DNA-directed RNA polymerase subunit omega
DNA-directed RNA polymerase, omega subunit {ECO:0000313|EMBL:AEW01350.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
SCNpilot_cont_500_bf_scaffold_2327_7
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

7243..8493
DNA (1251bp) protein (417aa)
phosphopantothenoylcysteine decarboxylase/phosphopantothenate/cysteine ligase; K13038 phosphopantothenoylcysteine decarboxylase / phosphopantothenate--cysteine ligase [EC:4.1.1.36 6.3.2.5] rbh
Phosphopantothenoylcysteine decarboxylase/phosphopantothenate/cysteine ligase {ECO:0000313|EMBL:AEW01349.1}; EC=6.3.2.5 {ECO:0000313|EMBL:AEW01349.1};; Flags: Precursor;; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
Phosphopantothenoylcysteine decarboxylase/phosphopantothenate/cysteine ligase n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TB02_NIAKG rbh
SCNpilot_cont_500_bf_scaffold_2327_8
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

8486..9409
DNA (924bp) protein (308aa)
Uncharacterized protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TB01_NIAKG rbh
Uncharacterized protein {ECO:0000313|EMBL:KIC91979.1}; TaxID=1349421 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter solisilvae.;"
hypothetical protein rbh
SCNpilot_cont_500_bf_scaffold_2327_9
unknown

Not on your lists

9406..9585
DNA (180bp) protein (60aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_2327_10
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

9971..10669
DNA (699bp) protein (233aa)
3-oxoacid CoA-transferase subunit A; K01028 3-oxoacid CoA-transferase subunit A [EC:2.8.3.5] rbh
3-oxoacid CoA-transferase, A subunit {ECO:0000313|EMBL:ACU64364.1}; EC=2.8.3.5 {ECO:0000313|EMBL:ACU64364.1};; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM; 2034).;"
3-oxoacid CoA-transferase, A subunit n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PRC5_CHIPD rbh
SCNpilot_cont_500_bf_scaffold_2327_11
Flavihumibacter sp. ZG627, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

10680..11336
DNA (657bp) protein (219aa)
3-oxoacid CoA-transferase subunit B; K01029 3-oxoacid CoA-transferase subunit B [EC:2.8.3.5] rbh
3-oxoacid CoA-transferase, B subunit n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PRC4_CHIPD rbh
Succinyl-CoA:3-ketoacid-CoA transferase {ECO:0000313|EMBL:KIC89386.1}; TaxID=1463156 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter sp. ZG627.;"
SCNpilot_cont_500_bf_scaffold_2327_12
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(11342..11983)
DNA (642bp) protein (214aa)
Uncharacterized protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TAZ7_NIAKG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEW01344.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
SCNpilot_cont_500_bf_scaffold_2327_13
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(12023..12673)
DNA (651bp) protein (217aa)
Two component transcriptional regulator, LuxR family n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TAZ6_NIAKG rbh
two component transcriptional regulator, LuxR family rbh
Two component transcriptional regulator, LuxR family {ECO:0000313|EMBL:AEW01343.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
SCNpilot_cont_500_bf_scaffold_2327_14
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(12727..13572)
DNA (846bp) protein (282aa)
Putative signal transduction histidine kinase n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TAZ5_NIAKG rbh
putative signal transduction histidine kinase rbh
Putative signal transduction histidine kinase {ECO:0000313|EMBL:AEW01342.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
SCNpilot_cont_500_bf_scaffold_2327_15
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(13642..14298)
DNA (657bp) protein (219aa)
Uncharacterized protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TAZ4_NIAKG
Uncharacterized protein {ECO:0000313|EMBL:KIC91985.1}; TaxID=1349421 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter solisilvae.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_2327_16
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(14356..14724)
DNA (369bp) protein (123aa)
Uncharacterized protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TAZ3_NIAKG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEW01340.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
SCNpilot_cont_500_bf_scaffold_2327_17
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

15568..16227
DNA (660bp) protein (220aa)
Two component transcriptional regulator, LuxR family n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TAZ2_NIAKG rbh
two component transcriptional regulator, LuxR family rbh
Two component transcriptional regulator, LuxR family {ECO:0000313|EMBL:AEW01339.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
SCNpilot_cont_500_bf_scaffold_2327_18
Flavihumibacter petaseus, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(16252..16923)
DNA (672bp) protein (224aa)
Two component transcriptional regulator, LuxR family n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TIP8_NIAKG
Putative two-component response regulator {ECO:0000313|EMBL:GAO45286.1}; TaxID=1220578 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter petaseus NBRC 106054.;"
two component transcriptional regulator, LuxR family
SCNpilot_cont_500_bf_scaffold_2327_19
Joostella marina, Joostella, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(16945..17727)
DNA (783bp) protein (261aa)
Histidine kinase n=1 Tax=Joostella marina DSM 19592 RepID=I3CA06_9FLAO
Histidine kinase {ECO:0000313|EMBL:EIJ40449.1}; TaxID=926559 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Joostella.;" source="Joostella marina DSM 19592.;"
histidine kinase
SCNpilot_cont_500_bf_scaffold_2327_20
unknown

Not on your lists

comp(17706..18398)
DNA (693bp) protein (231aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_2327_21
unknown

Not on your lists

18588..18914
DNA (327bp) protein (109aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_2327_22
unknown

Not on your lists

18927..19055
DNA (129bp) protein (43aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_2327_23
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

19399..20070
DNA (672bp) protein (224aa)
Two component transcriptional regulator, LuxR family n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8T9W7_NIAKG rbh
two component transcriptional regulator, LuxR family rbh
Two component transcriptional regulator, LuxR family {ECO:0000313|EMBL:AEW01311.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
SCNpilot_cont_500_bf_scaffold_2327_24
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

20176..20886
DNA (711bp) protein (237aa)
class IV aminotransferase; K00826 branched-chain amino acid aminotransferase [EC:2.6.1.42]
Aminotransferase class IV n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PRC3_CHIPD
Aminotransferase class IV {ECO:0000313|EMBL:ACU64362.1}; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM; 2034).;"
SCNpilot_cont_500_bf_scaffold_2327_25
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

20873..22183
DNA (1311bp) protein (437aa)
deoxyribodipyrimidine photo-lyase; K01669 deoxyribodipyrimidine photo-lyase [EC:4.1.99.3] rbh
Deoxyribodipyrimidine photo-lyase {ECO:0000313|EMBL:AEW01313.1}; EC=4.1.99.3 {ECO:0000313|EMBL:AEW01313.1};; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
Deoxyribodipyrimidine photo-lyase n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8T9W9_NIAKG rbh
SCNpilot_cont_500_bf_scaffold_2327_26
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(22156..22989)
DNA (834bp) protein (278aa)
1,4-dihydroxy-6-naphtoate synthase {ECO:0000256|HAMAP-Rule:MF_00996}; EC=4.1.-.- {ECO:0000256|HAMAP-Rule:MF_00996};; Menaquinone biosynthetic enzyme MqnD {ECO:0000256|HAMAP-Rule:MF_00996}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
Uncharacterized protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8T9X2_NIAKG rbh
hypothetical protein; K07083 rbh
SCNpilot_cont_500_bf_scaffold_2327_27
unknown

Not on your lists

23173..23772
DNA (600bp) protein (200aa)

This feature has no annotations

Displaying 27 items

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