ggKbase home page

SCNpilot_cont_500_bf_scaffold_2599

Search features with annotation key words

Displaying 9 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_500_bf_scaffold_2599_1
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(121..2391)
DNA (2271bp) protein (757aa)
Alpha-1,2-mannosidase n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TBJ6_NIAKG rbh
alpha-1,2-mannosidase rbh
Alpha-1,2-mannosidase {ECO:0000313|EMBL:AEV97106.1}; Flags: Precursor;; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
SCNpilot_cont_500_bf_scaffold_2599_2
Pedobacter sp. NL19, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(2388..2708)
DNA (321bp) protein (107aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI00037702F5
Contig65, whole genome shotgun sequence {ECO:0000313|EMBL:KIO76345.1}; TaxID=1503925 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter sp. NL19.;"
thioredoxin; K03671 thioredoxin 1
SCNpilot_cont_500_bf_scaffold_2599_3
Pedobacter sp. V48, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(3384..5591)
DNA (2208bp) protein (736aa)
alpha-galactosidase; K07407 alpha-galactosidase [EC:3.2.1.22] rbh
Glycoside hydrolase clan GH-D n=1 Tax=Mucilaginibacter paludis DSM 18603 RepID=H1Y960_9SPHI rbh
Alpha-galactosidase {ECO:0000313|EMBL:ETZ22240.1}; TaxID=509635 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter sp. V48.;"
SCNpilot_cont_500_bf_scaffold_2599_4
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

5639..6205
DNA (567bp) protein (189aa)
Uncharacterized protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TLQ2_NIAKG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEV97644.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
SCNpilot_cont_500_bf_scaffold_2599_5
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(6231..7928)
DNA (1698bp) protein (566aa)
beta-N-acetylhexosaminidase; K12373 hexosaminidase [EC:3.2.1.52] rbh
Beta-N-acetylhexosaminidase {ECO:0000313|EMBL:ACU59294.1}; EC=3.2.1.52 {ECO:0000313|EMBL:ACU59294.1};; Flags: Precursor;; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM; 2034).;"
Beta-N-acetylhexosaminidase n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PA57_CHIPD rbh
SCNpilot_cont_500_bf_scaffold_2599_6
Solitalea canadensis, Solitalea, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(8128..8829)
DNA (702bp) protein (234aa)
Response regulator of the LytR/AlgR family n=1 Tax=Solitalea canadensis (strain ATCC 29591 / DSM 3403 / NBRC 15130 / NCIMB 12057 / USAM 9D) RepID=H8KWE0_SOLCM
response regulator of the LytR/AlgR family
Response regulator of the LytR/AlgR family {ECO:0000313|EMBL:AFD07932.1}; TaxID=929556 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Solitalea.;" source="Solitalea canadensis (strain ATCC 29591 / DSM 3403 / NBRC 15130 /; NCIMB 12057 / USAM 9D) (Flexibacter canadensis).;"
SCNpilot_cont_500_bf_scaffold_2599_7
Flavihumibacter petaseus, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(8826..9716)
DNA (891bp) protein (297aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI00035FDC18
Putative two-component histidine kinase {ECO:0000313|EMBL:GAO41940.1}; TaxID=1220578 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter petaseus NBRC 106054.;"
putative regulator of cell autolysis
SCNpilot_cont_500_bf_scaffold_2599_8
GWF2_Bacteroidetes_35_48_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(9881..10648)
DNA (768bp) protein (256aa)
Putative uncharacterized protein id=2995272 bin=GWF2_Bacteroidetes_35_48 species=Paludibacter propionicigenes genus=Paludibacter taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_35_48 organism_group=Bacteroidetes organism_desc=a81
hypothetical protein
Tax=GWF2_Bacteroidetes_35_48_curated
SCNpilot_cont_500_bf_scaffold_2599_9
GWF2_Bacteroidetes_41_31_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(10678..12885)
DNA (2208bp) protein (736aa)
TonB-dependent receptor id=4321642 bin=GWF2_Bacteroidetes_41_31 species=Paludibacter propionicigenes genus=Paludibacter taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_41_31 organism_group=Bacteroidetes rbh
tonb-dependent receptor rbh
Tax=GWF2_Bacteroidetes_41_31_curated
Displaying 9 items

View Taxonomy