ggKbase home page

SCNpilot_cont_500_bf_scaffold_9602

Search features with annotation key words

Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_500_bf_scaffold_9602_1
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

comp(2..2839)
DNA (2838bp) protein (946aa)
PA14 domain protein n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XL26_9BACT rbh
PA14 domain protein {ECO:0000313|EMBL:EEF59520.1}; Flags: Precursor;; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
Fibronectin type III domain./Legume lectin domain
SCNpilot_cont_500_bf_scaffold_9602_2
Hassallia byssoidea, Hassallia, Nostocales, Cyanobacteria, Bacteria

Not on your lists

3033..5303
DNA (2271bp) protein (757aa)
hypothetical protein n=1 Tax=Flexithrix dorotheae RepID=UPI00036448A9 rbh
Uncharacterized protein {ECO:0000313|EMBL:KIF31540.1}; TaxID=1304833 species="Bacteria; Cyanobacteria; Nostocales; Microchaetaceae; Hassallia.;" source="Hassallia byssoidea VB512170.;"
protein of unknown function DUF214
SCNpilot_cont_500_bf_scaffold_9602_3
Flavihumibacter petaseus, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

5414..5758
DNA (345bp) protein (115aa)
hypothetical protein n=1 Tax=Cytophaga aurantiaca RepID=UPI000361B1B5
Putative ArsR family transcriptional regulator {ECO:0000313|EMBL:GAO41437.1}; TaxID=1220578 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter petaseus NBRC 106054.;"
regulatory protein ArsR
SCNpilot_cont_500_bf_scaffold_9602_4
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

6150..6923
DNA (774bp) protein (258aa)
Uncharacterized protein {ECO:0000313|EMBL:KIC93995.1}; TaxID=1349421 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter solisilvae.;"
SCNpilot_cont_500_bf_scaffold_9602_5
Anditalea andensis, Anditalea, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

6990..7316
DNA (327bp) protein (109aa)
Regulatory protein ArsR n=1 Tax=Mucilaginibacter paludis DSM 18603 RepID=H1Y355_9SPHI
ArsR family transcriptional regulator {ECO:0000313|EMBL:KEO75933.1}; TaxID=1048983 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Anditalea.;" source="Anditalea andensis.;"
regulatory protein ArsR
SCNpilot_cont_500_bf_scaffold_9602_6
RIFOXYC2_FULL_RIF_IGX_35_21_curated, RIF-IGX, Bacteria

Not on your lists

comp(7322..7693)
DNA (372bp) protein (124aa)
Cupin 2 conserved barrel domain protein id=1868162 bin=GWA2_Ignavibacteria-rel_35_8 species=Niastella koreensis genus=Niastella taxon_order=Sphingobacteriales taxon_class=Sphingobacteriia phylum=Bacteroidetes tax=GWA2_Ignavibacteria-rel_35_8 organism_group=Ignavibacteria
cupin
Tax=RIFOXYC2_FULL_RIF_IGX_35_21_curated
SCNpilot_cont_500_bf_scaffold_9602_7
Arcticibacter svalbardensis, Arcticibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(7705..8418)
DNA (714bp) protein (238aa)
Xanthine and CO dehydrogenase maturation factor, XdhC/CoxF family n=1 Tax=Arcticibacter svalbardensis MN12-7 RepID=R9GP58_9SPHI
Xanthine and CO dehydrogenase maturation factor, XdhC/CoxF family {ECO:0000313|EMBL:EOR93508.1}; TaxID=1150600 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Arcticibacter.;" source="Arcticibacter svalbardensis MN12-7.;"
xanthine dehydrogenase
SCNpilot_cont_500_bf_scaffold_9602_8
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(8516..8728)
DNA (213bp) protein (71aa)
Xanthine dehydrogenase n=1 Tax=Sphingobacterium sp. (strain 21) RepID=F4C4B4_SPHS2
xanthine dehydrogenase
Alanine dehydrogenase {ECO:0000313|EMBL:KIC93668.1}; TaxID=1349421 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter solisilvae.;"
SCNpilot_cont_500_bf_scaffold_9602_9
Mucilaginibacter paludis, Mucilaginibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(8729..10861)
DNA (2133bp) protein (711aa)
molybdopterin binding aldehyde oxidase and xanthine dehydrogenase; K11177 xanthine dehydrogenase YagR molybdenum-binding subunit [EC:1.17.1.4] rbh
Aldehyde oxidase and xanthine dehydrogenase molybdopterin binding n=1 Tax=Mucilaginibacter paludis DSM 18603 RepID=H1Y767_9SPHI rbh
Aldehyde oxidase and xanthine dehydrogenase molybdopterin binding {ECO:0000313|EMBL:EHQ28686.1}; TaxID=714943 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Mucilaginibacter.;" source="Mucilaginibacter paludis DSM 18603.;"
SCNpilot_cont_500_bf_scaffold_9602_10
Mucilaginibacter paludis, Mucilaginibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(10872..11858)
DNA (987bp) protein (329aa)
FAD-binding molybdopterin dehydrogenase; K11178 xanthine dehydrogenase YagS FAD-binding subunit [EC:1.17.1.4] rbh
Molybdopterin dehydrogenase FAD-binding n=1 Tax=Mucilaginibacter paludis DSM 18603 RepID=H1Y766_9SPHI rbh
Molybdopterin dehydrogenase FAD-binding {ECO:0000313|EMBL:EHQ28685.1}; TaxID=714943 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Mucilaginibacter.;" source="Mucilaginibacter paludis DSM 18603.;"
SCNpilot_cont_500_bf_scaffold_9602_11
Mucilaginibacter paludis, Mucilaginibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(11855..12478)
DNA (624bp) protein (208aa)
xanthine dehydrogenase YagT iron-sulfur-binding subunit (EC:1.2.99.2)
(2Fe-2S)-binding domain-containing protein n=1 Tax=Mucilaginibacter paludis DSM 18603 RepID=H1Y765_9SPHI rbh
(2Fe-2S)-binding domain-containing protein {ECO:0000313|EMBL:EHQ28684.1}; TaxID=714943 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Mucilaginibacter.;" source="Mucilaginibacter paludis DSM 18603.;"
SCNpilot_cont_500_bf_scaffold_9602_12
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

12579..13001
DNA (423bp) protein (141aa)
Metal-dependent phosphohydrolase HD region n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TEN6_NIAKG
metal-dependent phosphohydrolase
Metal-dependent phosphohydrolase HD region {ECO:0000313|EMBL:AEW00472.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
Displaying 12 items

View Taxonomy