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SCNpilot_cont_500_bf_scaffold_568

Search features with annotation key words

Displaying items 1-30 of 52 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_500_bf_scaffold_568_1
unknown

Not on your lists

2..97
DNA (96bp) protein (32aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_568_2
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

263..1324
DNA (1062bp) protein (354aa)
Putative signal transduction histidine kinase n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TIY8_NIAKG
putative signal transduction histidine kinase
Putative signal transduction histidine kinase {ECO:0000313|EMBL:AEV97505.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
SCNpilot_cont_500_bf_scaffold_568_3
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

1321..1977
DNA (657bp) protein (219aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI0003763C39 rbh
Thioredoxin {ECO:0000313|EMBL:KIC96424.1}; TaxID=1349421 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter solisilvae.;"
thioredoxin; K07396 putative protein-disulfide isomerase
SCNpilot_cont_500_bf_scaffold_568_4
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

2088..2783
DNA (696bp) protein (232aa)
Uncharacterized protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TCI6_NIAKG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEW02526.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
SCNpilot_cont_500_bf_scaffold_568_5
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

2804..4519
DNA (1716bp) protein (572aa)
oligoendopeptidase; K08602 oligoendopeptidase F [EC:3.4.24.-] rbh
Oligoendopeptidase, M3 family n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TCI7_NIAKG rbh
Oligoendopeptidase, M3 family {ECO:0000313|EMBL:AEW02527.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
SCNpilot_cont_500_bf_scaffold_568_6
Flavihumibacter petaseus, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(4757..5182)
DNA (426bp) protein (142aa)
Ferric uptake regulator, Fur family n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TCI8_NIAKG
Uncharacterized protein {ECO:0000313|EMBL:GAO42237.1}; TaxID=1220578 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter petaseus NBRC 106054.;"
ferric uptake regulator family protein; K03711 Fur family transcriptional regulator, ferric uptake regulator
SCNpilot_cont_500_bf_scaffold_568_7
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(5187..5852)
DNA (666bp) protein (222aa)
Electron transport protein SCO1/SenC n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TCI9_NIAKG
Electron transporter SenC {ECO:0000313|EMBL:KIC96536.1}; TaxID=1349421 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter solisilvae.;"
electron transport protein SCO1/SenC; K07152
SCNpilot_cont_500_bf_scaffold_568_8
Flavihumibacter sp. ZG627, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

6010..6420
DNA (411bp) protein (137aa)
Uncharacterized protein n=1 Tax=Niabella soli DSM 19437 RepID=H1NR33_9SPHI
Uncharacterized protein {ECO:0000313|EMBL:KIC91003.1}; TaxID=1463156 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter sp. ZG627.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_568_9
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

6522..7115
DNA (594bp) protein (198aa)
Scaffold protein Nfu/NifU n=1 Tax=Niabella soli DSM 19437 RepID=H1NRT1_9SPHI
Thioredoxin {ECO:0000313|EMBL:KIC96413.1}; TaxID=1349421 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter solisilvae.;"
Scaffold protein Nfu/NifU
SCNpilot_cont_500_bf_scaffold_568_10
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

7153..7812
DNA (660bp) protein (220aa)
Nicotinamide mononucleotide transporter PnuC n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TCJ4_NIAKG
nicotinamide mononucleotide transporter PnuC; K03811 nicotinamide mononucleotide transporter
Nicotinamide mononucleotide transporter PnuC {ECO:0000313|EMBL:AEW02534.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
SCNpilot_cont_500_bf_scaffold_568_11
Flavihumibacter sp. ZG627, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

7889..8491
DNA (603bp) protein (201aa)
NAD metabolism ATPase/kinase-like protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TCJ5_NIAKG
ATPase {ECO:0000313|EMBL:KIC90993.1}; TaxID=1463156 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter sp. ZG627.;"
NAD metabolism ATPase/kinase-like protein
SCNpilot_cont_500_bf_scaffold_568_12
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(8480..9181)
DNA (702bp) protein (234aa)
monofunctional biosynthetic peptidoglycan transglycosylase; K03814 monofunctional biosynthetic peptidoglycan transglycosylase [EC:2.4.1.-] rbh
Monofunctional biosynthetic peptidoglycan transglycosylase {ECO:0000256|HAMAP-Rule:MF_00766, ECO:0000256|SAAS:SAAS00055690}; Short=Monofunctional TGase {ECO:0000256|HAMAP-Rule:MF_00766};; EC=2.4.2.- {ECO:0000256|HAMAP-Rule:MF_00766, ECO:0000256|SAAS:SAAS00055699};; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
Monofunctional biosynthetic peptidoglycan transglycosylase n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TCJ7_NIAKG rbh
SCNpilot_cont_500_bf_scaffold_568_13
unknown

Not on your lists

comp(9307..9609)
DNA (303bp) protein (101aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_568_14
Elizabethkingia meningoseptica, Elizabethkingia, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(9590..9928)
DNA (339bp) protein (113aa)
hypothetical protein n=1 Tax=Spirosoma panaciterrae RepID=UPI0003722EEB
Uncharacterized protein {ECO:0000313|EMBL:EOR29890.1}; TaxID=1216967 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Elizabethkingia.;" source="Elizabethkingia meningoseptica ATCC 13253 = NBRC 12535.;"
hypothetical protein; K09946 hypothetical protein
SCNpilot_cont_500_bf_scaffold_568_15
Solitalea canadensis, Solitalea, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(10061..10492)
DNA (432bp) protein (144aa)
Uncharacterized protein n=1 Tax=Solitalea canadensis (strain ATCC 29591 / DSM 3403 / NBRC 15130 / NCIMB 12057 / USAM 9D) RepID=H8KS90_SOLCM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFD07878.1}; TaxID=929556 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Solitalea.;" source="Solitalea canadensis (strain ATCC 29591 / DSM 3403 / NBRC 15130 /; NCIMB 12057 / USAM 9D) (Flexibacter canadensis).;"
SCNpilot_cont_500_bf_scaffold_568_16
unknown

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comp(10535..11044)
DNA (510bp) protein (170aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_568_17
Flavihumibacter petaseus, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(11127..11837)
DNA (711bp) protein (237aa)
Lysine exporter protein (LYSE/YGGA) n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TCJ9_NIAKG
Putative RhtB family transporter {ECO:0000313|EMBL:GAO42251.1}; TaxID=1220578 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter petaseus NBRC 106054.;"
lysine exporter protein LysE/YggA
SCNpilot_cont_500_bf_scaffold_568_18
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(11804..13330)
DNA (1527bp) protein (509aa)
GH3 auxin-responsive promoter n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TCK0_NIAKG rbh
GH3 auxin-responsive promoter rbh
GH3 auxin-responsive promoter {ECO:0000313|EMBL:AEW02540.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
SCNpilot_cont_500_bf_scaffold_568_19
Flavihumibacter petaseus, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

13515..14234
DNA (720bp) protein (240aa)
hypothetical protein n=1 Tax=Spirosoma luteum RepID=UPI00036A18AB
Uncharacterized protein {ECO:0000313|EMBL:GAO44718.1}; TaxID=1220578 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter petaseus NBRC 106054.;"
SCNpilot_cont_500_bf_scaffold_568_20
Draconibacterium sp. JN14CK-3, Draconibacterium, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(14235..15224)
DNA (990bp) protein (330aa)
Putative glycosyltransferase n=1 Tax=Owenweeksia hongkongensis (strain DSM 17368 / JCM 12287 / NRRL B-23963) RepID=G8R3X3_OWEHD
Uncharacterized protein {ECO:0000313|EMBL:KJF43905.1}; TaxID=1544798 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prolixibacteraceae; Draconibacterium.;" source="Draconibacterium sp. JN14CK-3.;"
putative glycosyltransferase
SCNpilot_cont_500_bf_scaffold_568_21
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

15294..16079
DNA (786bp) protein (262aa)
inositol-phosphate phosphatase; K01092 myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25] rbh
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI00035F017D rbh
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
SCNpilot_cont_500_bf_scaffold_568_22
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

16090..17127
DNA (1038bp) protein (346aa)
thiamine-phosphate kinase; K00946 thiamine-monophosphate kinase [EC:2.7.4.16] rbh
Thiamine-monophosphate kinase {ECO:0000256|HAMAP-Rule:MF_02128}; Short=TMP kinase {ECO:0000256|HAMAP-Rule:MF_02128};; Short=Thiamine-phosphate kinase {ECO:0000256|HAMAP-Rule:MF_02128};; EC=2.7.4.16 {ECO:0000256|HAMAP-Rule:MF_02128};; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
Thiamine-monophosphate kinase n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TCK4_NIAKG rbh
SCNpilot_cont_500_bf_scaffold_568_23
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

17108..18670
DNA (1563bp) protein (521aa)
Peptidase S41 n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TCK5_NIAKG rbh
peptidase S41 rbh
Peptidase S41 {ECO:0000313|EMBL:AEW02545.1}; Flags: Precursor;; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
SCNpilot_cont_500_bf_scaffold_568_24
Porphyromonas gingivicanis, Porphyromonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

18842..19351
DNA (510bp) protein (170aa)
Alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen n=2 Tax=Myroides RepID=H1Z9R4_MYROD
Thiol:disulfide interchange protein {ECO:0000313|EMBL:KGN98276.1}; TaxID=266762 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Porphyromonas.;" source="Porphyromonas gingivicanis.;"
thiol-disulfide oxidoreductase resA
SCNpilot_cont_500_bf_scaffold_568_25
Clostridium sp. DL-VIII, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19424..20089)
DNA (666bp) protein (222aa)
hypothetical protein n=1 Tax=Rudanella lutea RepID=UPI000364450E
SAM-dependent methyltransferase {ECO:0000313|EMBL:EHI99834.1}; TaxID=641107 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. DL-VIII.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_568_26
Parabacteroides goldsteinii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(20097..21350)
DNA (1254bp) protein (418aa)
Uncharacterized protein n=2 Tax=Parabacteroides RepID=N2B0K3_9PORP rbh
Uncharacterized protein {ECO:0000313|EMBL:EOS17102.1}; TaxID=1235789 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides goldsteinii dnLKV18.;"
SCNpilot_cont_500_bf_scaffold_568_27
Singulisphaera acidiphila, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

comp(21384..23156)
DNA (1773bp) protein (591aa)
Uncharacterized protein n=1 Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0DQX1_SINAD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGA31408.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;"
SCNpilot_cont_500_bf_scaffold_568_28
Pedobacter sp. V48, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(23196..24383)
DNA (1188bp) protein (396aa)
Putative uncharacterized protein n=1 Tax=Pedobacter heparinus (strain ATCC 13125 / DSM 2366 / NCIB 9290) RepID=C6XSN5_PEDHD
Uncharacterized protein {ECO:0000313|EMBL:ETZ22965.1}; TaxID=509635 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter sp. V48.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_568_29
Tannerella forsythia, Tannerella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(24428..26149)
DNA (1722bp) protein (574aa)
SusD family protein n=1 Tax=Tannerella forsythia (strain ATCC 43037 / JCM 10827 / FDC 338) RepID=G8UQR4_TANFA rbh
SusD family protein {ECO:0000313|EMBL:BAR52029.1}; TaxID=1307833 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Tannerella.;" source="Tannerella forsythia KS16.;"
SusD family protein rbh
SCNpilot_cont_500_bf_scaffold_568_30
Tannerella forsythia, Tannerella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(26168..29317)
DNA (3150bp) protein (1050aa)
TonB-linked outer membrane protein, SusC/RagA family n=1 Tax=Tannerella forsythia (strain ATCC 43037 / JCM 10827 / FDC 338) RepID=G8UQR3_TANFA rbh
TonB-linked outer membrane protein, SusC/RagA family rbh
TonB-linked outer membrane protein, SusC/RagA family {ECO:0000313|EMBL:AEW20880.1}; TaxID=203275 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Tannerella.;" source="Tannerella forsythia (strain ATCC 43037 / JCM 10827 / FDC 338); (Bacteroides forsythus).;"
Displaying items 1-30 of 52 in total

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