ggKbase home page

SCNpilot_cont_500_bf_scaffold_997

Search features with annotation key words

Displaying items 1-30 of 31 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_500_bf_scaffold_997_1
Flavihumibacter sp. ZG627, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

3..803
DNA (801bp) protein (267aa)
Permease YjgP/YjgQ family protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TQK4_NIAKG
Permease {ECO:0000313|EMBL:KIC90571.1}; TaxID=1463156 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter sp. ZG627.;"
YjgP/YjgQ family permease
SCNpilot_cont_500_bf_scaffold_997_2
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

814..1329
DNA (516bp) protein (172aa)
Cation diffusion facilitator family transporter n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TQK3_NIAKG
cation diffusion facilitator family transporter
Cation diffusion facilitator family transporter {ECO:0000313|EMBL:AEW03250.1}; Flags: Precursor;; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
SCNpilot_cont_500_bf_scaffold_997_3
unknown

Not on your lists

comp(1215..1820)
DNA (606bp) protein (202aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_997_4
unknown

Not on your lists

comp(1831..2253)
DNA (423bp) protein (141aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_997_5
unknown

Not on your lists

comp(2265..4229)
DNA (1965bp) protein (655aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_997_6
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(4264..4533)
DNA (270bp) protein (90aa)
Histone family protein DNA-binding protein n=1 Tax=Niabella soli DSM 19437 RepID=H1NUW8_9SPHI
DNA-binding protein {ECO:0000313|EMBL:AHF15786.1}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
histone family protein DNA-binding protein; K03530 DNA-binding protein HU-beta
SCNpilot_cont_500_bf_scaffold_997_7
Flavihumibacter petaseus, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(4579..5265)
DNA (687bp) protein (229aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI00037390A9
Uncharacterized protein {ECO:0000313|EMBL:GAO41468.1}; TaxID=1220578 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter petaseus NBRC 106054.;"
PKD domain-containing protein
SCNpilot_cont_500_bf_scaffold_997_8
Pontibacter sp. BAB1700, Pontibacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(5319..6482)
DNA (1164bp) protein (388aa)
hypothetical protein n=1 Tax=Nafulsella turpanensis RepID=UPI00034D3D41
Hyalin domain-containing protein {ECO:0000313|EMBL:EJF10173.1}; TaxID=1144253 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Pontibacter.;" source="Pontibacter sp. BAB1700.;"
hyalin domain-containing protein
SCNpilot_cont_500_bf_scaffold_997_9
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(6523..8481)
DNA (1959bp) protein (653aa)
Amidohydrolase n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TBQ1_NIAKG rbh
amidohydrolase rbh
Amidohydrolase {ECO:0000313|EMBL:AEV98183.1}; Flags: Precursor;; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
SCNpilot_cont_500_bf_scaffold_997_10
Treponema medium, Treponema, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

comp(8521..8877)
DNA (357bp) protein (119aa)
Uncharacterized protein n=1 Tax=Treponema medium ATCC 700293 RepID=S3KZ35_TREMD
Uncharacterized protein {ECO:0000313|EMBL:EPF29714.1}; TaxID=1125700 species="Bacteria; Spirochaetes; Spirochaetales; Spirochaetaceae; Treponema.;" source="Treponema medium ATCC 700293.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_997_11
Spirosoma radiotolerans, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

8968..11901
DNA (2934bp) protein (978aa)
Glycoside hydrolase family 9 n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PCV5_CHIPD rbh
Glycoside hydrolase {ECO:0000313|EMBL:AKD56705.1}; TaxID=1379870 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma radiotolerans.;"
glycoside hydrolase rbh
SCNpilot_cont_500_bf_scaffold_997_12
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

12252..12974
DNA (723bp) protein (241aa)
RNA polymerase, sigma-24 subunit, ECF subfamily n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TPX0_NIAKG
ECF subfamily RNA polymerase sigma-24 subunit; K03088 RNA polymerase sigma-70 factor, ECF subfamily
RNA polymerase, sigma-24 subunit, ECF subfamily {ECO:0000313|EMBL:AEV99964.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
SCNpilot_cont_500_bf_scaffold_997_13
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

13084..14361
DNA (1278bp) protein (426aa)
Anti-FecI sigma factor, FecR n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TM28_NIAKG
anti-FecI sigma factor FecR
Anti-FecI sigma factor, FecR {ECO:0000313|EMBL:AEV99801.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
SCNpilot_cont_500_bf_scaffold_997_14
Mucilaginibacter paludis, Mucilaginibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

14769..18425
DNA (3657bp) protein (1219aa)
TonB-dependent receptor n=1 Tax=Mucilaginibacter paludis DSM 18603 RepID=H1Y3Z9_9SPHI rbh
TonB-dependent receptor {ECO:0000313|EMBL:EHQ30944.1}; TaxID=714943 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Mucilaginibacter.;" source="Mucilaginibacter paludis DSM 18603.;"
SusC/RagA family TonB-linked outer membrane protein rbh
SCNpilot_cont_500_bf_scaffold_997_15
Mucilaginibacter paludis, Mucilaginibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

18441..19871
DNA (1431bp) protein (477aa)
Putative uncharacterized protein n=1 Tax=Mucilaginibacter paludis DSM 18603 RepID=H1Y400_9SPHI rbh
Putative uncharacterized protein {ECO:0000313|EMBL:EHQ30945.1}; TaxID=714943 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Mucilaginibacter.;" source="Mucilaginibacter paludis DSM 18603.;"
RagB/SusD family protein rbh
SCNpilot_cont_500_bf_scaffold_997_16
Arcticibacter svalbardensis, Arcticibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

19910..21391
DNA (1482bp) protein (494aa)
Uncharacterized protein n=1 Tax=Arcticibacter svalbardensis MN12-7 RepID=R9GWU2_9SPHI
Uncharacterized protein {ECO:0000313|EMBL:EOR96277.1}; TaxID=1150600 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Arcticibacter.;" source="Arcticibacter svalbardensis MN12-7.;"
thiol-disulfide isomerase-like thioredoxin
SCNpilot_cont_500_bf_scaffold_997_17
unknown

Not on your lists

comp(21436..21732)
DNA (297bp) protein (99aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_997_18
unknown

Not on your lists

comp(21829..22128)
DNA (300bp) protein (100aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_997_19
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(22167..22616)
DNA (450bp) protein (150aa)
Uncharacterized protein n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PBD5_CHIPD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACU61273.1}; Flags: Precursor;; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM; 2034).;"
SCNpilot_cont_500_bf_scaffold_997_20
Mucilaginibacter paludis, Mucilaginibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(22620..24011)
DNA (1392bp) protein (464aa)
Serine/threonine protein kinase n=1 Tax=Mucilaginibacter paludis DSM 18603 RepID=H1Y404_9SPHI
Serine/threonine protein kinase {ECO:0000313|EMBL:EHQ30949.1}; Flags: Precursor;; TaxID=714943 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Mucilaginibacter.;" source="Mucilaginibacter paludis DSM 18603.;"
serine/threonine protein kinase
SCNpilot_cont_500_bf_scaffold_997_21
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(23992..25524)
DNA (1533bp) protein (511aa)
Uncharacterized protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TM88_NIAKG rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:AEV99861.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
SCNpilot_cont_500_bf_scaffold_997_22
unknown

Not on your lists

comp(25521..25727)
DNA (207bp) protein (69aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_997_23
Paenibacillus barengoltzii, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(25923..26384)
DNA (462bp) protein (154aa)
Uncharacterized protein n=1 Tax=Paenibacillus barengoltzii G22 RepID=R9LD16_9BACL
Uncharacterized protein {ECO:0000313|EMBL:EOS53632.1}; TaxID=1235795 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus barengoltzii G22.;"
AraC family transcriptional regulator
SCNpilot_cont_500_bf_scaffold_997_24
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

26648..28009
DNA (1362bp) protein (454aa)
Beta-Ala-His dipeptidase {ECO:0000313|EMBL:AEW03249.1}; EC=3.4.13.20 {ECO:0000313|EMBL:AEW03249.1};; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
Beta-Ala-His dipeptidase n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TQK2_NIAKG rbh
Beta-Ala-His dipeptidase rbh
SCNpilot_cont_500_bf_scaffold_997_25
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(28012..31275)
DNA (3264bp) protein (1088aa)
Uncharacterized protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TEC1_NIAKG rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:AEV98331.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
SCNpilot_cont_500_bf_scaffold_997_26
Hassallia byssoidea, Hassallia, Nostocales, Cyanobacteria, Bacteria

Not on your lists

comp(31323..32498)
DNA (1176bp) protein (392aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI00037CBF07 rbh
Uncharacterized protein {ECO:0000313|EMBL:KIF33862.1}; TaxID=1304833 species="Bacteria; Cyanobacteria; Nostocales; Microchaetaceae; Hassallia.;" source="Hassallia byssoidea VB512170.;"
hypothetical protein rbh
SCNpilot_cont_500_bf_scaffold_997_27
Flammeovirgaceae bacterium 311, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(32514..33704)
DNA (1191bp) protein (397aa)
Uncharacterized protein n=1 Tax=Gillisia limnaea DSM 15749 RepID=H2BXP5_9FLAO
Acidobacterial duplicated orphan (ADOP) ABC-type permease-like protein {ECO:0000313|EMBL:AHM62865.1}; TaxID=1257021 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Flammeovirgaceae; unclassified Flammeovirgaceae.;" source="Flammeovirgaceae bacterium 311.;"
acidobacterial duplicated orphan (ADOP) ABC-type permease-like protein
SCNpilot_cont_500_bf_scaffold_997_28
Flammeovirgaceae bacterium 311, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(33713..34948)
DNA (1236bp) protein (412aa)
Uncharacterized protein n=1 Tax=Gillisia limnaea DSM 15749 RepID=H2BXP5_9FLAO
Acidobacterial duplicated orphan (ADOP) ABC-type permease-like protein {ECO:0000313|EMBL:AHM62865.1}; TaxID=1257021 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Flammeovirgaceae; unclassified Flammeovirgaceae.;" source="Flammeovirgaceae bacterium 311.;"
acidobacterial duplicated orphan (ADOP) ABC-type permease-like protein
SCNpilot_cont_500_bf_scaffold_997_29
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

35070..35459
DNA (390bp) protein (130aa)
Heat shock protein Hsp15 n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TQK1_NIAKG
heat shock protein Hsp15; K04762 ribosome-associated heat shock protein Hsp15
Heat shock protein Hsp15 {ECO:0000313|EMBL:AEW03248.1}; Flags: Precursor;; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
SCNpilot_cont_500_bf_scaffold_997_30
unknown

Not on your lists

comp(35462..35764)
DNA (303bp) protein (101aa)

This feature has no annotations

Displaying items 1-30 of 31 in total

View Taxonomy