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SCNpilot_cont_500_bf_scaffold_1268

Search features with annotation key words

Displaying items 1-30 of 36 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_500_bf_scaffold_1268_1
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(1..2025)
DNA (2025bp) protein (675aa)
TonB-dependent receptor plug n=1 Tax=Haliscomenobacter hydrossis (strain ATCC 27775 / DSM 1100 / LMG 10767 / O) RepID=F4KTI3_HALH1 rbh
TonB-dependent receptor plug rbh
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
SCNpilot_cont_500_bf_scaffold_1268_2
Chryseobacterium gleum, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(2463..3056)
DNA (594bp) protein (198aa)
metallophosphoesterase; K07313 serine/threonine protein phosphatase 1 [EC:3.1.3.16]
Ser/Thr phosphatase family protein n=1 Tax=Chryseobacterium gleum ATCC 35910 RepID=D7W0W9_9FLAO
Ser/Thr phosphatase family protein {ECO:0000313|EMBL:EFK36145.1}; TaxID=525257 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium gleum ATCC 35910.;"
SCNpilot_cont_500_bf_scaffold_1268_3
GWF2_Bacteroidetes_35_48_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(3080..4096)
DNA (1017bp) protein (339aa)
hypothetical protein GobsU_00775 id=2995520 bin=GWF2_Bacteroidetes_35_48 species=Gemmata obscuriglobus genus=Gemmata taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWF2_Bacteroidetes_35_48 organism_group=Bacteroidetes organism_desc=a81 rbh
RNA ligase, DRB0094 family rbh
Tax=GWF2_Bacteroidetes_35_48_curated
SCNpilot_cont_500_bf_scaffold_1268_4
Sporocytophaga myxococcoides, Sporocytophaga, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(4449..5318)
DNA (870bp) protein (290aa)
Transposase family protein n=7 Tax=Opitutaceae bacterium TAV1 RepID=I6AYH2_9BACT
Transposase {ECO:0000313|EMBL:GAL85240.1}; TaxID=153721 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Sporocytophaga.;" source="Sporocytophaga myxococcoides.;"
SCNpilot_cont_500_bf_scaffold_1268_5
unknown

Not on your lists

5946..6095
DNA (150bp) protein (50aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_1268_6
Sphingobacterium sp. 21, Sphingobacterium, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

6180..6398
DNA (219bp) protein (73aa)
Uncharacterized protein n=1 Tax=Sphingobacterium sp. (strain 21) RepID=F4C982_SPHS2
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADZ78409.1}; TaxID=743722 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" source="Sphingobacterium sp. (strain 21).;"
SCNpilot_cont_500_bf_scaffold_1268_7
Beggiatoa sp. PS, Beggiatoa, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6395..6799
DNA (405bp) protein (135aa)
Nucleic acid-binding protein, contains PIN domain n=1 Tax=Beggiatoa sp. PS RepID=A7BXH1_9GAMM
Nucleic acid-binding protein, contains PIN domain {ECO:0000313|EMBL:EDN68762.1}; TaxID=422289 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Beggiatoa.;" source="Beggiatoa sp. PS.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_1268_8
Pseudoalteromonas marina, Pseudoalteromonas, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7160..7795)
DNA (636bp) protein (212aa)
id=3341371 bin=GWC2_Bacteroidetes_40_13 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Bacteroidetes_40_13 organism_group=Bacteroidetes
Uncharacterized protein {ECO:0000313|EMBL:ERG25378.1}; Flags: Fragment;; TaxID=1117316 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Pseudoalteromonadaceae; Pseudoalteromonas.;" source="Pseudoalteromonas marina mano4.;"
SCNpilot_cont_500_bf_scaffold_1268_9
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(8009..9346)
DNA (1338bp) protein (446aa)
Integrase family protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8THP6_NIAKG rbh
integrase family protein rbh
Integrase family protein {ECO:0000313|EMBL:AEV97474.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
SCNpilot_cont_500_bf_scaffold_1268_10
unknown

Not on your lists

comp(9567..9722)
DNA (156bp) protein (52aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_1268_11
Anditalea andensis, Anditalea, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(9829..10431)
DNA (603bp) protein (201aa)
hypothetical protein n=1 Tax=Scytonema hofmanni RepID=UPI00034BC400
Uncharacterized protein {ECO:0000313|EMBL:KEO72255.1}; TaxID=1048983 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Anditalea.;" source="Anditalea andensis.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_1268_12
Anditalea andensis, Anditalea, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(10435..11913)
DNA (1479bp) protein (493aa)
Uncharacterized protein {ECO:0000313|EMBL:KEO72256.1}; TaxID=1048983 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Anditalea.;" source="Anditalea andensis.;"
Putative uncharacterized protein id=2024120 bin=GWE2_Bacteroidetes_29_8 species=Vibrio ordalii genus=Vibrio taxon_order=Vibrionales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWE2_Bacteroidetes_29_8 organism_group=Bacteroidetes organism_desc=Good
hypothetical protein
SCNpilot_cont_500_bf_scaffold_1268_13
unknown

Not on your lists

11961..12101
DNA (141bp) protein (47aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_1268_14
Anditalea andensis, Anditalea, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(12037..13428)
DNA (1392bp) protein (464aa)
hsdS; Type I restriction-modification system specificity determinant; K01154 type I restriction enzyme, S subunit [EC:3.1.21.3]
Type I restriction-modification system specificity determinant n=1 Tax=Arcobacter butzleri (strain RM4018) RepID=A8EVJ0_ARCB4
Uncharacterized protein {ECO:0000313|EMBL:KEO72258.1}; TaxID=1048983 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Anditalea.;" source="Anditalea andensis.;"
SCNpilot_cont_500_bf_scaffold_1268_15
Ornithobacterium rhinotracheale, Ornithobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(13418..15751)
DNA (2334bp) protein (778aa)
N-6 DNA methylase n=1 Tax=Riemerella columbina RepID=UPI00036FB166 rbh
type I restriction-modification system methyltransferase subunit rbh
Type I restriction-modification system methyltransferase subunit {ECO:0000313|EMBL:AFL96974.1}; TaxID=867902 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Ornithobacterium.;" source="Ornithobacterium rhinotracheale (strain ATCC 51463 / DSM 15997 / CCUG; 23171 / LMG 9086).;"
SCNpilot_cont_500_bf_scaffold_1268_16
RIFCSPLOWO2_12_FULL_Bacteroidetes_37_12_curated, Bacteroidetes, Bacteria

Not on your lists

comp(15772..16056)
DNA (285bp) protein (95aa)
Putative DNA binding protein n=1 Tax=Flavobacterium psychrophilum (strain JIP02/86 / ATCC 49511) RepID=A6GXL5_FLAPJ
DNA binding protein
Tax=RIFCSPLOWO2_12_FULL_Bacteroidetes_37_12_curated
SCNpilot_cont_500_bf_scaffold_1268_17
Zunongwangia profunda, Zunongwangia, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(16182..16547)
DNA (366bp) protein (122aa)
Lambda repressor-like DNA-binding protein n=1 Tax=Zunongwangia profunda (strain DSM 18752 / CCTCC AB 206139 / SM-A87) RepID=D5BJK8_ZUNPS
lambda repressor-like DNA-binding protein
Lambda repressor-like DNA-binding protein {ECO:0000313|EMBL:ADF51674.1}; TaxID=655815 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Zunongwangia.;" source="Zunongwangia profunda (strain DSM 18752 / CCTCC AB 206139 / SM-A87).;"
SCNpilot_cont_500_bf_scaffold_1268_18
unknown

Not on your lists

16940..17380
DNA (441bp) protein (147aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_1268_19
unknown

Not on your lists

17388..17609
DNA (222bp) protein (74aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_1268_20
Zunongwangia profunda, Zunongwangia, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

17697..18380
DNA (684bp) protein (228aa)
Uncharacterized protein n=1 Tax=Zunongwangia profunda (strain DSM 18752 / CCTCC AB 206139 / SM-A87) RepID=D5BJT5_ZUNPS
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADF53783.1}; TaxID=655815 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Zunongwangia.;" source="Zunongwangia profunda (strain DSM 18752 / CCTCC AB 206139 / SM-A87).;"
SCNpilot_cont_500_bf_scaffold_1268_21
unknown

Not on your lists

18388..18684
DNA (297bp) protein (99aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_1268_22
unknown

Not on your lists

18737..18922
DNA (186bp) protein (62aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_1268_23
unknown

Not on your lists

19240..19947
DNA (708bp) protein (236aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_1268_24
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

20045..20296
DNA (252bp) protein (84aa)
Uncharacterized protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TAI0_NIAKG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEV98142.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
SCNpilot_cont_500_bf_scaffold_1268_25
unknown

Not on your lists

20434..20721
DNA (288bp) protein (96aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_1268_26
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

20690..22234
DNA (1545bp) protein (515aa)
Resolvase domain protein n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PIX1_CHIPD rbh
resolvase domain-containing protein rbh
Resolvase domain protein {ECO:0000313|EMBL:ACU60055.1}; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM; 2034).;"
SCNpilot_cont_500_bf_scaffold_1268_27
unknown

Not on your lists

22425..23720
DNA (1296bp) protein (432aa)
integrase family protein
SCNpilot_cont_500_bf_scaffold_1268_28
unknown

Not on your lists

23925..24230
DNA (306bp) protein (102aa)
hypothetical protein n=1 Tax=Dyadobacter beijingensis RepID=UPI000375E44C
SCNpilot_cont_500_bf_scaffold_1268_29
unknown

Not on your lists

24341..24574
DNA (234bp) protein (78aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_1268_30
unknown

Not on your lists

comp(24701..24958)
DNA (258bp) protein (86aa)

This feature has no annotations

Displaying items 1-30 of 36 in total

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