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SCNpilot_cont_500_bf_scaffold_1657

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Displaying 23 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_500_bf_scaffold_1657_1
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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2..613
DNA (612bp) protein (204aa)
Anti-FecI sigma factor, FecR n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T7F5_PALPW
anti-feci sigma factor, fecr
Anti-FecI sigma factor, FecR {ECO:0000313|EMBL:ADQ80649.1}; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Paludibacter.;" source="Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4).;"
SCNpilot_cont_500_bf_scaffold_1657_2
Flavobacterium hibernum, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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707..4057
DNA (3351bp) protein (1117aa)
TonB-dependent receptor n=1 Tax=Flavobacterium sp. F52 RepID=J1KX99_9FLAO rbh
Strain DSM 12611 Contig15, whole genome shotgun sequence {ECO:0000313|EMBL:KIO51463.1}; TaxID=37752 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium hibernum.;"
TonB-dependent receptor plug
SCNpilot_cont_500_bf_scaffold_1657_3
Pedobacter kyungheensis, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

4071..5591
DNA (1521bp) protein (507aa)
hypothetical protein n=1 Tax=Flavobacterium sp. WG21 RepID=UPI00034DFB8A rbh
SusD/RagB family lipoprotein {ECO:0000313|EMBL:KIA94297.1}; TaxID=1069985 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter kyungheensis.;"
SusD/RagB family lipoprotein
SCNpilot_cont_500_bf_scaffold_1657_4
Flavobacterium sp. F52, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

5598..6362
DNA (765bp) protein (255aa)
Uncharacterized protein n=1 Tax=Flavobacterium sp. F52 RepID=J1KY96_9FLAO
Uncharacterized protein {ECO:0000313|EMBL:EJG02881.1}; TaxID=1202532 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium sp. F52.;"
SCNpilot_cont_500_bf_scaffold_1657_5
Flavobacterium sp. F52, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

6436..6936
DNA (501bp) protein (167aa)
hypothetical protein n=1 Tax=Flavobacterium sp. WG21 RepID=UPI00034DBDA2
Uncharacterized protein {ECO:0000313|EMBL:EJG02881.1}; TaxID=1202532 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium sp. F52.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_1657_6
Flavobacterium hibernum, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

6965..7966
DNA (1002bp) protein (334aa)
hypothetical protein n=1 Tax=Flavobacterium sp. WG21 RepID=UPI00034C8CBB rbh
Strain DSM 12611 Contig15, whole genome shotgun sequence {ECO:0000313|EMBL:KIO51465.1}; TaxID=37752 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium hibernum.;"
cytochrome c class I
SCNpilot_cont_500_bf_scaffold_1657_7
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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8196..8582
DNA (387bp) protein (129aa)
Globin family protein n=1 Tax=Niabella soli DSM 19437 RepID=H1NKD8_9SPHI
Globin {ECO:0000313|EMBL:KIC95486.1}; TaxID=1349421 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter solisilvae.;"
globin family protein; K06886 hemoglobin
SCNpilot_cont_500_bf_scaffold_1657_8
Solitalea canadensis, Solitalea, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

8632..9225
DNA (594bp) protein (198aa)
Endonuclease III {ECO:0000256|PIRNR:PIRNR001435}; EC=4.2.99.18 {ECO:0000256|PIRNR:PIRNR001435};; TaxID=929556 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Solitalea.;" source="Solitalea canadensis (strain ATCC 29591 / DSM 3403 / NBRC 15130 /; NCIMB 12057 / USAM 9D) (Flexibacter canadensis).;"
Endonuclease III n=1 Tax=Solitalea canadensis (strain ATCC 29591 / DSM 3403 / NBRC 15130 / NCIMB 12057 / USAM 9D) RepID=H8KU66_SOLCM
putative endoIII-related endonuclease
SCNpilot_cont_500_bf_scaffold_1657_9
Mucilaginibacter paludis, Mucilaginibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

9318..11387
DNA (2070bp) protein (690aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; Flags: Precursor;; TaxID=714943 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Mucilaginibacter.;" source="Mucilaginibacter paludis DSM 18603.;"
multi-sensor signal transduction histidine kinase id=7718893 bin=BACIGN_2 species=Mucilaginibacter paludis genus=Mucilaginibacter taxon_order=Sphingobacteriales taxon_class=Sphingobacteriia phylum=Bacteroidetes tax=BACIGN_2 organism_group=Unknown_CP rbh
multi-sensor signal transduction histidine kinase
SCNpilot_cont_500_bf_scaffold_1657_10
Flavihumibacter petaseus, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

11678..12994
DNA (1317bp) protein (439aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI00035DDEF2 rbh
Peptidase M38 family protein {ECO:0000313|EMBL:GAO42615.1}; TaxID=1220578 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter petaseus NBRC 106054.;"
amidohydrolase rbh
SCNpilot_cont_500_bf_scaffold_1657_11
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(13009..16173)
DNA (3165bp) protein (1055aa)
DNA polymerase III subunit alpha; K14162 error-prone DNA polymerase [EC:2.7.7.7] rbh
DNA-directed DNA polymerase {ECO:0000256|SAAS:SAAS00057170}; EC=2.7.7.7 {ECO:0000256|SAAS:SAAS00057170};; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114).;"
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI000366014B
SCNpilot_cont_500_bf_scaffold_1657_12
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(16177..17679)
DNA (1503bp) protein (501aa)
Nucleotidyltransferase/DNA polymerase involved in DNA repair n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PT58_CHIPD rbh
DNA repair nucleotidyltransferase/DNA polymerase; K14161 protein ImuB rbh
Nucleotidyltransferase/DNA polymerase involved in DNA repair {ECO:0000313|EMBL:ACU60848.1}; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM; 2034).;"
SCNpilot_cont_500_bf_scaffold_1657_13
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(17685..18413)
DNA (729bp) protein (243aa)
Uncharacterized protein n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PT59_CHIPD
hypothetical protein; K14160 protein ImuA
Uncharacterized protein {ECO:0000313|EMBL:ACU60849.1}; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM; 2034).;"
SCNpilot_cont_500_bf_scaffold_1657_14
Pedobacter sp. V48, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(18521..22111)
DNA (3591bp) protein (1197aa)
Uncharacterized protein n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PJ80_CHIPD rbh
Uncharacterized protein {ECO:0000313|EMBL:ETZ20397.1}; TaxID=509635 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter sp. V48.;"
hypothetical protein rbh
SCNpilot_cont_500_bf_scaffold_1657_15
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(22113..22421)
DNA (309bp) protein (103aa)
YHS domain-containing protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8T7Q2_NIAKG
YHS domain-containing protein
YHS domain-containing protein {ECO:0000313|EMBL:AEW03346.1}; Flags: Precursor;; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
SCNpilot_cont_500_bf_scaffold_1657_16
Runella slithyformis, Runella, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(22483..23442)
DNA (960bp) protein (320aa)
Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase n=1 Tax=Runella slithyformis (strain ATCC 29530 / DSM 19594 / LMG 11500 / NCIMB 11436 / LSU 4) RepID=F8EI22_RUNSL
nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase
Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase {ECO:0000313|EMBL:AEI50767.1}; TaxID=761193 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Runella.;" source="Runella slithyformis (strain ATCC 29530 / DSM 19594 / LMG 11500 /; NCIMB 11436 / LSU 4).;"
SCNpilot_cont_500_bf_scaffold_1657_17
Pedobacter sp. NL19, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(23507..24295)
DNA (789bp) protein (263aa)
hypothetical protein n=1 Tax=Flavobacterium sp. WG21 RepID=UPI0003494062
Contig13, whole genome shotgun sequence {ECO:0000313|EMBL:KIO78499.1}; TaxID=1503925 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter sp. NL19.;"
transcriptional regulator, AraC family
SCNpilot_cont_500_bf_scaffold_1657_18
Flavihumibacter petaseus, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(24373..25068)
DNA (696bp) protein (232aa)
glycosyl hydrolase n=1 Tax=Cytophagales str. B6 RepID=UPI0003B5AD64 rbh
Uncharacterized protein {ECO:0000313|EMBL:GAO43245.1}; TaxID=1220578 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter petaseus NBRC 106054.;"
hypothetical protein rbh
SCNpilot_cont_500_bf_scaffold_1657_19
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(25171..26367)
DNA (1197bp) protein (399aa)
Oxidoreductase domain protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8T752_NIAKG rbh
oxidoreductase domain-containing protein rbh
Oxidoreductase domain protein {ECO:0000313|EMBL:AEW00077.1}; Flags: Precursor;; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
SCNpilot_cont_500_bf_scaffold_1657_20
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

26546..27790
DNA (1245bp) protein (415aa)
Glucokinase n=1 Tax=Niabella soli DSM 19437 RepID=H1NMT3_9SPHI rbh
Glucokinase {ECO:0000313|EMBL:AHF14437.1}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
ROK family transcriptional repressor protein rbh
SCNpilot_cont_500_bf_scaffold_1657_21
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(27807..28913)
DNA (1107bp) protein (369aa)
Uncharacterized protein n=1 Tax=Niabella soli DSM 19437 RepID=H1NJT9_9SPHI
Uncharacterized protein {ECO:0000313|EMBL:AHF14106.1}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_1657_22
Pedobacter heparinus, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(28910..30148)
DNA (1239bp) protein (413aa)
Major facilitator superfamily MFS_1 n=1 Tax=Pedobacter heparinus (strain ATCC 13125 / DSM 2366 / NCIB 9290) RepID=C6Y387_PEDHD rbh
major facilitator superfamily protein; K08191 MFS transporter, ACS family, hexuronate transporter rbh
Major facilitator superfamily MFS_1 {ECO:0000313|EMBL:ACU05312.1}; TaxID=485917 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter heparinus (strain ATCC 13125 / DSM 2366 / NCIB 9290).;"
SCNpilot_cont_500_bf_scaffold_1657_23
Flammeovirgaceae bacterium 311, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(30189..30971)
DNA (783bp) protein (261aa)
Uncharacterized protein n=1 Tax=Cyclobacteriaceae bacterium AK24 RepID=R7ZVD5_9BACT
Amidohydrolase {ECO:0000313|EMBL:AHM63039.1}; TaxID=1257021 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Flammeovirgaceae; unclassified Flammeovirgaceae.;" source="Flammeovirgaceae bacterium 311.;"
amidohydrolase
Displaying 23 items

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