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SCNpilot_cont_500_bf_scaffold_1974

Search features with annotation key words

Displaying items 1-30 of 46 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_500_bf_scaffold_1974_1
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

3..1010
DNA (1008bp) protein (336aa)
Methionine synthase n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8T7I9_NIAKG rbh
5-methyltetrahydrofolate--homocysteine methyltransferase {ECO:0000313|EMBL:KIC95988.1}; TaxID=1349421 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter solisilvae.;"
methionine synthase rbh
SCNpilot_cont_500_bf_scaffold_1974_2
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

1108..3828
DNA (2721bp) protein (907aa)
Methionine synthase (B12-dependent) {ECO:0000313|EMBL:AEW02245.1}; EC=2.1.1.13 {ECO:0000313|EMBL:AEW02245.1};; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
methionine synthase; K00548 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13] rbh
methionine synthase n=1 Tax=Segetibacter koreensis RepID=UPI000370C780 rbh
SCNpilot_cont_500_bf_scaffold_1974_3
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

4182..5000
DNA (819bp) protein (273aa)
Uncharacterized protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8T7J1_NIAKG rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:AEW02246.1}; Flags: Precursor;; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
SCNpilot_cont_500_bf_scaffold_1974_4
Flavihumibacter sp. ZG627, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

5099..6325
DNA (1227bp) protein (409aa)
Putative uncharacterized protein n=1 Tax=Maribacter sp. (strain HTCC2170 / KCCM 42371) RepID=A4AUB1_MARSH
Uncharacterized protein {ECO:0000313|EMBL:KIC91601.1}; TaxID=1463156 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter sp. ZG627.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_1974_5
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(6353..7102)
DNA (750bp) protein (250aa)
Uncharacterized protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8T7J2_NIAKG rbh
hypothetical protein; K06966 rbh
Uncharacterized protein {ECO:0000313|EMBL:AEW02247.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
SCNpilot_cont_500_bf_scaffold_1974_6
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

7245..8024
DNA (780bp) protein (260aa)
exodeoxyribonuclease III Xth; K01142 exodeoxyribonuclease III [EC:3.1.11.2] rbh
Exodeoxyribonuclease III Xth {ECO:0000313|EMBL:AEW02248.1}; EC=3.1.11.2 {ECO:0000313|EMBL:AEW02248.1};; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
Exodeoxyribonuclease III Xth n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8T7J3_NIAKG rbh
SCNpilot_cont_500_bf_scaffold_1974_7
Mucilaginibacter paludis, Mucilaginibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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8128..10572
DNA (2445bp) protein (815aa)
hypothetical protein n=1 Tax=Cytophagales str. B6 RepID=UPI0003B6AED4 rbh
Putative uncharacterized protein {ECO:0000313|EMBL:EHQ28693.1}; Flags: Precursor;; TaxID=714943 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Mucilaginibacter.;" source="Mucilaginibacter paludis DSM 18603.;"
hypothetical protein rbh
SCNpilot_cont_500_bf_scaffold_1974_8
unknown

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10550..10975
DNA (426bp) protein (142aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_1974_9
Flavihumibacter petaseus, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

11049..11774
DNA (726bp) protein (242aa)
hypothetical protein n=1 Tax=Cytophagales str. B6 RepID=UPI0003B36742
Uncharacterized protein {ECO:0000313|EMBL:GAO44847.1}; TaxID=1220578 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter petaseus NBRC 106054.;"
SCNpilot_cont_500_bf_scaffold_1974_10
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

11732..12325
DNA (594bp) protein (198aa)
Uncharacterized protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8T7J4_NIAKG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEW02249.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
SCNpilot_cont_500_bf_scaffold_1974_11
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

12519..12788
DNA (270bp) protein (90aa)
Histone family protein DNA-binding protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8T7J5_NIAKG
Transcriptional regulator HU subunit alpha {ECO:0000313|EMBL:KIC95229.1}; TaxID=1349421 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter solisilvae.;"
histone family protein DNA-binding protein; K03530 DNA-binding protein HU-beta
SCNpilot_cont_500_bf_scaffold_1974_12
unknown

Not on your lists

12926..13039
DNA (114bp) protein (38aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_1974_13
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(13067..13711)
DNA (645bp) protein (215aa)
Pyridoxamine 5'-phosphate oxidase; K00275 pyridoxamine 5'-phosphate oxidase [EC:1.4.3.5] rbh
Pyridoxine/pyridoxamine 5'-phosphate oxidase {ECO:0000256|HAMAP-Rule:MF_01629}; EC=1.4.3.5 {ECO:0000256|HAMAP-Rule:MF_01629};; PNP/PMP oxidase {ECO:0000256|HAMAP-Rule:MF_01629}; Pyridoxal 5'-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_01629}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
Pyridoxine/pyridoxamine 5'-phosphate oxidase n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8T7J7_NIAKG rbh
SCNpilot_cont_500_bf_scaffold_1974_14
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(13730..14830)
DNA (1101bp) protein (367aa)
Uncharacterized protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8T7J9_NIAKG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEW02254.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
SCNpilot_cont_500_bf_scaffold_1974_15
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(15116..15829)
DNA (714bp) protein (238aa)
uridylate kinase; K09903 uridylate kinase [EC:2.7.4.22] rbh
Uridylate kinase {ECO:0000256|HAMAP-Rule:MF_01220, ECO:0000256|SAAS:SAAS00197273}; Short=UK {ECO:0000256|HAMAP-Rule:MF_01220};; EC=2.7.4.22 {ECO:0000256|HAMAP-Rule:MF_01220, ECO:0000256|SAAS:SAAS00197270};; Uridine monophosphate kinase {ECO:0000256|HAMAP-Rule:MF_01220}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
Uridylate kinase n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8T7K0_NIAKG rbh
SCNpilot_cont_500_bf_scaffold_1974_16
Flavihumibacter petaseus, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(15897..16703)
DNA (807bp) protein (269aa)
elongation factor Ts n=1 Tax=Segetibacter koreensis RepID=UPI00036F2FFF
Elongation factor Ts {ECO:0000256|HAMAP-Rule:MF_00050}; Short=EF-Ts {ECO:0000256|HAMAP-Rule:MF_00050};; TaxID=1220578 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter petaseus NBRC 106054.;"
elongation factor Ts; K02357 elongation factor Ts
SCNpilot_cont_500_bf_scaffold_1974_17
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists


comp(16747..17622)
DNA (876bp) protein (292aa)
30S ribosomal protein S2 n=1 Tax=Segetibacter koreensis RepID=UPI00035DEB64 rbh
30S ribosomal protein S2 {ECO:0000256|HAMAP-Rule:MF_00291}; TaxID=1349421 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter solisilvae.;"
30S ribosomal protein S2; K02967 small subunit ribosomal protein S2 rbh
SCNpilot_cont_500_bf_scaffold_1974_18
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists


comp(17687..18049)
DNA (363bp) protein (121aa)
30S ribosomal protein S9 n=1 Tax=Segetibacter koreensis RepID=UPI000376B685
30S ribosomal protein S9; K02996 small subunit ribosomal protein S9
30S ribosomal protein S9 {ECO:0000256|RuleBase:RU003816}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
SCNpilot_cont_500_bf_scaffold_1974_19
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists


comp(18062..18505)
DNA (444bp) protein (148aa)
50S ribosomal protein L13 n=1 Tax=Segetibacter koreensis RepID=UPI000375B0E6
50S ribosomal protein L13; K02871 large subunit ribosomal protein L13
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
SCNpilot_cont_500_bf_scaffold_1974_20
unknown

Not on your lists

18787..18981
DNA (195bp) protein (65aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_1974_21
Pedobacter antarcticus, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

18999..19367
DNA (369bp) protein (123aa)
XRE family transcriptional regulator n=1 Tax=Cytophagales str. B6 RepID=UPI0003B337BE
XRE family transcriptional regulator {ECO:0000313|EMBL:KEQ31219.1}; TaxID=1358423 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter antarcticus 4BY.;"
XRE family transcriptional regulator
SCNpilot_cont_500_bf_scaffold_1974_22
unknown

Not on your lists

comp(19377..19490)
DNA (114bp) protein (38aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_1974_23
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

19559..20170
DNA (612bp) protein (204aa)
Uncharacterized protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8T7K9_NIAKG rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:AEW02264.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
SCNpilot_cont_500_bf_scaffold_1974_24
unknown

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comp(20193..20642)
DNA (450bp) protein (150aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_1974_25
unknown

Not on your lists

comp(20639..21025)
DNA (387bp) protein (129aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_1974_26
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(21073..22572)
DNA (1500bp) protein (500aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI0003627F81 rbh
Uncharacterized protein {ECO:0000313|EMBL:KIC95212.1}; TaxID=1349421 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter solisilvae.;"
alpha amylase
SCNpilot_cont_500_bf_scaffold_1974_27
Flavihumibacter sp. ZG627, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(22605..23948)
DNA (1344bp) protein (448aa)
Uncharacterized protein n=1 Tax=Arcticibacter svalbardensis MN12-7 RepID=R9GY08_9SPHI
Uncharacterized protein {ECO:0000313|EMBL:KIC91233.1}; TaxID=1463156 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter sp. ZG627.;"
1,4-alpha-glucan-branching protein
SCNpilot_cont_500_bf_scaffold_1974_28
Haliscomenobacter hydrossis, Haliscomenobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(23996..25156)
DNA (1161bp) protein (387aa)
Uncharacterized protein n=1 Tax=Haliscomenobacter hydrossis (strain ATCC 27775 / DSM 1100 / LMG 10767 / O) RepID=F4L020_HALH1
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEE52729.1}; TaxID=760192 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Saprospiraceae; Haliscomenobacter.;" source="Haliscomenobacter hydrossis (strain ATCC 27775 / DSM 1100 / LMG 10767; / O).;"
SCNpilot_cont_500_bf_scaffold_1974_29
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(25189..26022)
DNA (834bp) protein (278aa)
Uncharacterized protein n=1 Tax=Haliscomenobacter hydrossis (strain ATCC 27775 / DSM 1100 / LMG 10767 / O) RepID=F4L020_HALH1
Uncharacterized protein {ECO:0000313|EMBL:KIC95215.1}; TaxID=1349421 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter solisilvae.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_1974_30
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(26042..27685)
DNA (1644bp) protein (548aa)
RagB/SusD domain protein n=1 Tax=Leadbetterella byssophila (strain DSM 17132 / KACC 11308 / 4M15) RepID=E4RWB3_LEAB4 rbh
Uncharacterized protein {ECO:0000313|EMBL:KIC95214.1}; TaxID=1349421 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter solisilvae.;"
ragb/susd domain protein rbh
Displaying items 1-30 of 46 in total

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