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SCNpilot_cont_500_bf_scaffold_8630

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Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_500_bf_scaffold_8630_1
Dysgonomonas gadei, Dysgonomonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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1..576
DNA (576bp) protein (192aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI000377AE0B
Uncharacterized protein {ECO:0000313|EMBL:EGK02398.1}; TaxID=742766 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Dysgonomonas.;" source="Dysgonomonas gadei ATCC BAA-286.;"
mobilization protein BmgA
SCNpilot_cont_500_bf_scaffold_8630_2
unknown

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610..1257
DNA (648bp) protein (216aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI000379A589
SCNpilot_cont_500_bf_scaffold_8630_3
unknown

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comp(1537..1872)
DNA (336bp) protein (112aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_8630_4
Zunongwangia profunda, Zunongwangia, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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comp(1869..2585)
DNA (717bp) protein (239aa)
Uncharacterized protein n=1 Tax=Zunongwangia profunda (strain DSM 18752 / CCTCC AB 206139 / SM-A87) RepID=D5BJT5_ZUNPS
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADF53783.1}; TaxID=655815 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Zunongwangia.;" source="Zunongwangia profunda (strain DSM 18752 / CCTCC AB 206139 / SM-A87).;"
SCNpilot_cont_500_bf_scaffold_8630_5
unknown

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comp(2582..2905)
DNA (324bp) protein (108aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_8630_6
Prevotella buccae, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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3430..3639
DNA (210bp) protein (70aa)
DNA-binding helix-turn-helix protein n=1 Tax=Prevotella buccae D17 RepID=D3HYW2_9BACT
DNA-binding helix-turn-helix protein {ECO:0000313|EMBL:EFC75581.1}; TaxID=575611 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella.;" source="Prevotella buccae D17.;"
helix-turn-helix domain-containing protein
SCNpilot_cont_500_bf_scaffold_8630_7
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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3720..4190
DNA (471bp) protein (157aa)
KAP P-loop domain protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8T8I5_NIAKG
KAP P-loop domain-containing protein
KAP P-loop domain protein {ECO:0000313|EMBL:AEW00157.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
SCNpilot_cont_500_bf_scaffold_8630_8
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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4229..5812
DNA (1584bp) protein (528aa)
KAP P-loop domain protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8T8I5_NIAKG rbh
KAP P-loop domain-containing protein rbh
KAP P-loop domain protein {ECO:0000313|EMBL:AEW00157.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
SCNpilot_cont_500_bf_scaffold_8630_9
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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comp(6062..6922)
DNA (861bp) protein (287aa)
Uncharacterized protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8T8I6_NIAKG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEW00158.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
SCNpilot_cont_500_bf_scaffold_8630_10
OD1_GWC2_34_28, Campbellbacteria, Parcubacteria, Bacteria

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7926..8549
DNA (624bp) protein (208aa)
phage repressor like transcriptional regulator, XRE family; K01356 repressor LexA [EC:3.4.21.88] id=5803689 bin=OD1_GWC2_34_28 species=Hyphomicrobium denitrificans genus=Hyphomicrobium taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
LexA repressor (EC:3.4.21.88)
Tax=OD1_GWC2_34_28
SCNpilot_cont_500_bf_scaffold_8630_11
Ralstonia solanacearum, Ralstonia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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8629..8826
DNA (198bp) protein (66aa)
Putative uncharacterized protein n=1 Tax=Ralstonia solanacearum K60-1 RepID=H5WBF9_RALSL
Putative uncharacterized protein {ECO:0000313|EMBL:CCF97130.1}; TaxID=1091042 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Ralstonia.;" source="Ralstonia solanacearum K60-1.;"
SCNpilot_cont_500_bf_scaffold_8630_12
unknown

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comp(8923..9141)
DNA (219bp) protein (73aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_8630_trna_1
unknown

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comp(9025..9108)
DNA (84bp)
transferRNA
Displaying 13 items

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