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SCNpilot_cont_500_bf_scaffold_3003

Search features with annotation key words

Displaying 22 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_500_bf_scaffold_3003_1
unknown

Not on your lists

comp(128..340)
DNA (213bp) protein (71aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_3003_2
Mucilaginibacter paludis, Mucilaginibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(568..1377)
DNA (810bp) protein (270aa)
tetracycline resistance element mobilization regulatory protein RteC n=1 Tax=Cytophagales str. B6 RepID=UPI0003B33B5B
Tetracycline regulation of excision, RteC {ECO:0000313|EMBL:EHQ24765.1}; TaxID=714943 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Mucilaginibacter.;" source="Mucilaginibacter paludis DSM 18603.;"
RteC protein.
SCNpilot_cont_500_bf_scaffold_3003_3
Hymenobacter sp. DG25B, Hymenobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(1519..2100)
DNA (582bp) protein (194aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI0003818EA4
Crp/Fnr family transcriptional regulator {ECO:0000313|EMBL:AIZ63951.1}; TaxID=1385664 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Hymenobacter.;" source="Hymenobacter sp. DG25B.;"
putative transcriptional regulator, Crp/Fnr family
SCNpilot_cont_500_bf_scaffold_3003_4
Elizabethkingia anophelis, Elizabethkingia, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

2417..3841
DNA (1425bp) protein (475aa)
Uncharacterized protein {ECO:0000313|EMBL:AIL46559.1}; TaxID=1338011 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Elizabethkingia.;" source="Elizabethkingia anophelis NUHP1.;"
SCNpilot_cont_500_bf_scaffold_3003_5
unknown

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3853..4230
DNA (378bp) protein (126aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_3003_6
unknown

Not on your lists

comp(4634..4936)
DNA (303bp) protein (101aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_3003_7
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(4993..5901)
DNA (909bp) protein (303aa)
Uncharacterized protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TGB4_NIAKG rbh
hypothetical protein; K07029 rbh
Uncharacterized protein {ECO:0000313|EMBL:AEW02753.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
SCNpilot_cont_500_bf_scaffold_3003_8
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(6052..7056)
DNA (1005bp) protein (335aa)
Uncharacterized protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TGC0_NIAKG rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:AEW02759.1}; Flags: Precursor;; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
SCNpilot_cont_500_bf_scaffold_3003_9
Flavihumibacter petaseus, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

7434..7790
DNA (357bp) protein (119aa)
GTP-binding protein TypA n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TGC3_NIAKG
GTP-binding protein TypA; K06207 GTP-binding protein
GTP-binding protein TypA {ECO:0000313|EMBL:GAO42106.1}; TaxID=1220578 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter petaseus NBRC 106054.;"
SCNpilot_cont_500_bf_scaffold_3003_10
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

7777..9219
DNA (1443bp) protein (481aa)
GTP-binding protein TypA n=1 Tax=Segetibacter koreensis RepID=UPI000361BF38
GTP-binding protein TypA; K06207 GTP-binding protein
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
SCNpilot_cont_500_bf_scaffold_3003_11
Flavihumibacter sp. ZG627, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

9260..9478
DNA (219bp) protein (73aa)
Uncharacterized protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TGC8_NIAKG
Uncharacterized protein {ECO:0000313|EMBL:KIC91167.1}; TaxID=1463156 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter sp. ZG627.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_3003_12
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

9551..10453
DNA (903bp) protein (301aa)
Putative uncharacterized protein n=1 Tax=Prevotella sp. C561 RepID=G1VG56_9BACT rbh
Uncharacterized protein {ECO:0000313|EMBL:KIC92902.1}; TaxID=1349421 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter solisilvae.;"
group 2 family glycosyltransferase rbh
SCNpilot_cont_500_bf_scaffold_3003_13
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(10461..12824)
DNA (2364bp) protein (788aa)
Uncharacterized protein n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PBN4_CHIPD rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:ACU63098.1}; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM; 2034).;"
SCNpilot_cont_500_bf_scaffold_3003_14
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(12921..13832)
DNA (912bp) protein (304aa)
LAO/AO transport system ATPase; K07588 LAO/AO transport system kinase [EC:2.7.-.-] rbh
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI00037B2E26 rbh
Transporter {ECO:0000313|EMBL:KIC95156.1}; TaxID=1349421 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter solisilvae.;"
SCNpilot_cont_500_bf_scaffold_3003_15
RBG_13_Bacteroidetes_43_22_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

13865..14653
DNA (789bp) protein (263aa)
hypothetical protein n=1 Tax=Cytophaga aurantiaca RepID=UPI0003825CE2
family 2 glycosyl transferase
Tax=RBG_13_Bacteroidetes_43_22_curated
SCNpilot_cont_500_bf_scaffold_3003_16
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

14631..15332
DNA (702bp) protein (234aa)
Peptidase S16 lon domain protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TGD2_NIAKG rbh
peptidase S16 lon domain-containing protein; K07157 rbh
Peptidase S16 lon domain protein {ECO:0000313|EMBL:AEW02771.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
SCNpilot_cont_500_bf_scaffold_3003_17
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

15344..16072
DNA (729bp) protein (243aa)
putative Baf family transcriptional acitvator; K03525 type III pantothenate kinase [EC:2.7.1.33] rbh
Type III pantothenate kinase {ECO:0000256|HAMAP-Rule:MF_01274}; EC=2.7.1.33 {ECO:0000256|HAMAP-Rule:MF_01274};; PanK-III {ECO:0000256|HAMAP-Rule:MF_01274}; Pantothenic acid kinase {ECO:0000256|HAMAP-Rule:MF_01274}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
Type III pantothenate kinase n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TGD3_NIAKG rbh
SCNpilot_cont_500_bf_scaffold_3003_18
Flavihumibacter petaseus, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

16044..16634
DNA (591bp) protein (197aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI000373F4FC
Uncharacterized protein {ECO:0000313|EMBL:GAO42069.1}; TaxID=1220578 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter petaseus NBRC 106054.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_3003_19
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

16659..17642
DNA (984bp) protein (328aa)
Aldo/keto reductase n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8THC8_NIAKG
aldo/keto reductase
Aldo/keto reductase {ECO:0000313|EMBL:AEW02774.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
SCNpilot_cont_500_bf_scaffold_3003_20
unknown

Not on your lists

17783..18328
DNA (546bp) protein (182aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_3003_21
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

18472..19116
DNA (645bp) protein (215aa)
Transcriptional regulator, TetR family n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8THD1_NIAKG
TetR family transcriptional regulator
Transcriptional regulator, TetR family {ECO:0000313|EMBL:AEW02777.1}; Flags: Precursor;; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
SCNpilot_cont_500_bf_scaffold_3003_22
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

19128..19409
DNA (282bp) protein (94aa)
Outer membrane efflux protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8THD2_NIAKG
outer membrane efflux protein
Outer membrane efflux protein {ECO:0000313|EMBL:AEW02778.1}; Flags: Precursor;; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
Displaying 22 items

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