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SCNpilot_cont_500_bf_scaffold_3023

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Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_500_bf_scaffold_3023_1
Elizabethkingia miricola, Elizabethkingia, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(2..1153)
DNA (1152bp) protein (384aa)
Cobalt-zinc-cadmium resistance protein CzcA n=1 Tax=uncultured bacterium A1Q1_fos_150 RepID=L7VVL5_9BACT
Metal transporter {ECO:0000313|EMBL:KGO08476.1}; TaxID=172045 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Elizabethkingia.;" source="Elizabethkingia miricola (Chryseobacterium miricola).;"
acriflavin resistance protein
SCNpilot_cont_500_bf_scaffold_3023_2
CG_Arma_02, Armatimonadetes, Bacteria

Not on your lists

comp(1159..1488)
DNA (330bp) protein (110aa)
hypothetical protein n=1 Tax=Spirosoma luteum RepID=UPI00035F5996
secretion protein HlyD
Tax=CG_Arma_02
SCNpilot_cont_500_bf_scaffold_3023_3
Sporocytophaga myxococcoides, Sporocytophaga, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(1522..1884)
DNA (363bp) protein (121aa)
hypothetical protein n=1 Tax=Nafulsella turpanensis RepID=UPI000347E50A
Cation-transporting ATPase {ECO:0000313|EMBL:GAL85850.1}; TaxID=153721 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Sporocytophaga.;" source="Sporocytophaga myxococcoides.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_3023_4
Pedobacter heparinus, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(2029..2445)
DNA (417bp) protein (139aa)
Putative uncharacterized protein n=1 Tax=Pedobacter heparinus (strain ATCC 13125 / DSM 2366 / NCIB 9290) RepID=C6Y2P4_PEDHD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACU05254.1}; TaxID=485917 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter heparinus (strain ATCC 13125 / DSM 2366 / NCIB 9290).;"
SCNpilot_cont_500_bf_scaffold_3023_5
unknown

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comp(2980..3276)
DNA (297bp) protein (99aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_3023_6
Zunongwangia profunda, Zunongwangia, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

3716..4528
DNA (813bp) protein (271aa)
RNA polymerase n=1 Tax=Gillisia marina RepID=UPI000299FAC3
RNA polymerase ECF-type sigma factor
RNA polymerase ECF-type sigma factor {ECO:0000313|EMBL:ADF54722.1}; TaxID=655815 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Zunongwangia.;" source="Zunongwangia profunda (strain DSM 18752 / CCTCC AB 206139 / SM-A87).;"
SCNpilot_cont_500_bf_scaffold_3023_7
Pedobacter kyungheensis, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

4525..5622
DNA (1098bp) protein (366aa)
Uncharacterized protein n=1 Tax=Sphingobacterium sp. IITKGP-BTPF85 RepID=T0P0Z5_9SPHI rbh
Uncharacterized protein {ECO:0000313|EMBL:KIA91200.1}; TaxID=1069985 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter kyungheensis.;"
hypothetical protein rbh
SCNpilot_cont_500_bf_scaffold_3023_8
unknown

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comp(6231..6419)
DNA (189bp) protein (63aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_3023_9
unknown

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comp(6397..6828)
DNA (432bp) protein (144aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_3023_10
unknown

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comp(6872..7471)
DNA (600bp) protein (200aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_3023_11
unknown

Not on your lists

comp(7484..8029)
DNA (546bp) protein (182aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_3023_12
Elizabethkingia meningoseptica, Elizabethkingia, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(8079..8462)
DNA (384bp) protein (128aa)
Chaperone DnaJ domain-containing protein n=1 Tax=Elizabethkingia meningoseptica ATCC 13253 = NBRC 12535 RepID=R9CND5_ELIME
Chaperone DnaJ domain-containing protein {ECO:0000313|EMBL:EOR30530.1}; TaxID=1216967 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Elizabethkingia.;" source="Elizabethkingia meningoseptica ATCC 13253 = NBRC 12535.;"
chaperone DnAJ; K05516 curved DNA-binding protein
SCNpilot_cont_500_bf_scaffold_3023_13
unknown

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comp(8536..8874)
DNA (339bp) protein (113aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_3023_14
GWF2_Bacteroidetes_43_11_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(8945..11149)
DNA (2205bp) protein (735aa)
hypothetical protein n=1 Tax=Flexithrix dorotheae RepID=UPI00037CD926 rbh
Signal transduction histidine kinase
Tax=GWF2_Bacteroidetes_43_11_curated
SCNpilot_cont_500_bf_scaffold_3023_15
GWF2_Bacteroidetes_43_11_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(11160..11594)
DNA (435bp) protein (145aa)
GCN5-related N-acetyltransferase n=1 Tax=Mucilaginibacter paludis DSM 18603 RepID=H1Y1L9_9SPHI
acetyltransferase
Tax=GWF2_Bacteroidetes_43_11_curated
Displaying 15 items

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