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SCNpilot_cont_500_bf_scaffold_3253

Search features with annotation key words

Displaying items 1-30 of 31 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_500_bf_scaffold_3253_1
GWF2_Bacteroidetes_43_11_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(1..528)
DNA (528bp) protein (176aa)
Peptidase S54, rhomboid domain n=1 Tax=Niabella soli DSM 19437 RepID=H1NNC3_9SPHI
Tax=GWF2_Bacteroidetes_43_11_curated
SCNpilot_cont_500_bf_scaffold_3253_2
unknown

Not on your lists

563..730
DNA (168bp) protein (56aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_3253_3
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

762..1565
DNA (804bp) protein (268aa)
TonB family protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TRW7_NIAKG
TonB family protein; K03832 periplasmic protein TonB
TonB family protein {ECO:0000313|EMBL:AEW03302.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
SCNpilot_cont_500_bf_scaffold_3253_4
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

1832..3028
DNA (1197bp) protein (399aa)
trmE; tRNA modification GTPase TrmE; K03650 tRNA modification GTPase [EC:3.6.-.-]
tRNA modification GTPase MnmE {ECO:0000256|HAMAP-Rule:MF_00379}; EC=3.6.-.- {ECO:0000256|HAMAP-Rule:MF_00379};; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM; 2034).;"
tRNA modification GTPase MnmE n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PRN4_CHIPD
SCNpilot_cont_500_bf_scaffold_3253_5
Chryseobacterium oranimense, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

3301..3684
DNA (384bp) protein (128aa)
Excisionase n=1 Tax=Galbibacter marinus RepID=K2Q446_9FLAO
Helix-turn-helix domain protein {ECO:0000313|EMBL:CEJ71564.1}; TaxID=1300143 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium oranimense G311.;"
excisionase family DNA binding domain-containing protein
SCNpilot_cont_500_bf_scaffold_3253_6
unknown

Not on your lists

3681..3902
DNA (222bp) protein (74aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_3253_7
Methanococcoides burtonii, Methanococcoides, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

4647..5714
DNA (1068bp) protein (356aa)
Putative uncharacterized protein n=1 Tax=Methanococcoides burtonii (strain DSM 6242 / NBRC 107633 / OCM 468 / ACE-M) RepID=Q12UX7_METBU
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABE52749.1}; TaxID=259564 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanococcoides.;" source="Methanococcoides burtonii (strain DSM 6242 / NBRC 107633 / OCM 468 /; ACE-M).;"
SCNpilot_cont_500_bf_scaffold_3253_8
Microcoleus vaginatus, Microcoleus, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

comp(5736..6392)
DNA (657bp) protein (219aa)
Uncharacterized protein n=1 Tax=Bacillus cereus H3081.97 RepID=B5V5C6_BACCE
Uncharacterized protein {ECO:0000313|EMBL:EGK83682.1}; TaxID=756067 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Microcoleus.;" source="Microcoleus vaginatus FGP-2.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_3253_9
Rivularia sp. PCC 7116, Rivularia, Nostocales, Cyanobacteria, Bacteria

Not on your lists

comp(6394..6795)
DNA (402bp) protein (134aa)
Crossover junction endodeoxyribonuclease RusA superfamily n=1 Tax=Bacillus cereus H3081.97 RepID=B5V5C5_BACCE
holliday junction resolvase
Holliday junction resolvase {ECO:0000313|EMBL:AFY53611.1}; TaxID=373994 species="Bacteria; Cyanobacteria; Nostocales; Rivulariaceae; Rivularia.;" source="Rivularia sp. PCC 7116.;"
SCNpilot_cont_500_bf_scaffold_3253_10
Clostridium sartagoforme, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7144..8808
DNA (1665bp) protein (555aa)
Uncharacterized protein n=1 Tax=Clostridium sartagoforme AAU1 RepID=R9C592_9CLOT rbh
Uncharacterized protein {ECO:0000313|EMBL:EOR24448.1}; TaxID=1202534 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sartagoforme AAU1.;"
ATP-dependent OLD family endonuclease rbh
SCNpilot_cont_500_bf_scaffold_3253_11
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(9429..9686)
DNA (258bp) protein (86aa)
Uncharacterized protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TRS4_NIAKG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEW02221.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
SCNpilot_cont_500_bf_scaffold_3253_12
Zunongwangia profunda, Zunongwangia, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(9705..10352)
DNA (648bp) protein (216aa)
Uncharacterized protein n=1 Tax=Zunongwangia profunda (strain DSM 18752 / CCTCC AB 206139 / SM-A87) RepID=D5BJT5_ZUNPS
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADF53783.1}; TaxID=655815 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Zunongwangia.;" source="Zunongwangia profunda (strain DSM 18752 / CCTCC AB 206139 / SM-A87).;"
SCNpilot_cont_500_bf_scaffold_3253_13
Hymenobacter sp. APR13, Hymenobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(10357..10920)
DNA (564bp) protein (188aa)
hypothetical protein n=1 Tax=Spirosoma panaciterrae RepID=UPI0003782DD1
Uncharacterized protein {ECO:0000313|EMBL:AII53885.1}; TaxID=1356852 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Hymenobacter.;" source="Hymenobacter sp. APR13.;"
putative Crp/Fnr family transcriptional regulator
SCNpilot_cont_500_bf_scaffold_3253_14
unknown

Not on your lists

11161..11625
DNA (465bp) protein (155aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_3253_15
Epilithonimonas sp. FH1, Epilithonimonas, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

11938..13074
DNA (1137bp) protein (379aa)
Probable transposase n=1 Tax=Flavobacterium branchiophilum (strain FL-15) RepID=G2Z2Y8_FLABF rbh
Transposase {ECO:0000313|EMBL:KFC19291.1}; TaxID=1233951 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Epilithonimonas.;" source="Epilithonimonas sp. FH1.;"
putative transposase rbh
SCNpilot_cont_500_bf_scaffold_3253_16
unknown

Not on your lists

13133..13879
DNA (747bp) protein (249aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_3253_17
unknown

Not on your lists

14308..14706
DNA (399bp) protein (133aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_3253_18
Spirosoma radiotolerans, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

14771..16141
DNA (1371bp) protein (457aa)
Putative uncharacterized protein n=1 Tax=Bacteroides ovatus 3_8_47FAA RepID=F7L9Y1_BACOV
Uncharacterized protein {ECO:0000313|EMBL:AKD56969.1}; TaxID=1379870 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma radiotolerans.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_3253_19
unknown

Not on your lists

16399..17076
DNA (678bp) protein (226aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_3253_20
Devosia soli, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17242..17874
DNA (633bp) protein (211aa)
Uncharacterized protein {ECO:0000313|EMBL:KKB79714.1}; TaxID=361041 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia soli.;"
SCNpilot_cont_500_bf_scaffold_3253_21
GWA2_Bacteroidetes_32_17_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

17855..18256
DNA (402bp) protein (134aa)
hypothetical protein n=1 Tax=Bacteroides propionicifaciens RepID=UPI00035FE847
hypothetical protein
Tax=GWA2_Bacteroidetes_32_17_curated
SCNpilot_cont_500_bf_scaffold_3253_22
Flammeovirgaceae bacterium 311, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

18791..19732
DNA (942bp) protein (314aa)
Uncharacterized protein n=1 Tax=Sphingobacterium sp. IITKGP-BTPF85 RepID=T0MVW6_9SPHI
Uncharacterized protein {ECO:0000313|EMBL:AHM63210.1}; TaxID=1257021 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Flammeovirgaceae; unclassified Flammeovirgaceae.;" source="Flammeovirgaceae bacterium 311.;"
SCNpilot_cont_500_bf_scaffold_3253_23
unknown

Not on your lists

19914..20351
DNA (438bp) protein (146aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_3253_24
unknown

Not on your lists

20356..20529
DNA (174bp) protein (58aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_3253_25
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20742..21806
DNA (1065bp) protein (355aa)
hypothetical protein n=1 Tax=Yersinia enterocolitica RepID=UPI0002FA7CAD
Trypsin-like serine protease {ECO:0000313|EMBL:AJE56631.1}; TaxID=562 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli.;"
SCNpilot_cont_500_bf_scaffold_3253_26

Not on your lists

22042..22377
DNA (336bp) protein (112aa)
Putative uncharacterized protein id=3341109 bin=GWC2_Bacteroidetes_40_13 species=Dokdonia donghaensis genus=Dokdonia taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWC2_Bacteroidetes_40_13 organism_group=Bacteroidetes
Uncharacterized protein {ECO:0000313|EMBL:KKN04785.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
tufB; protein chain elongation factor EF-Tu
SCNpilot_cont_500_bf_scaffold_3253_27
Leptospira biflexa, Leptospira, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

22385..22861
DNA (477bp) protein (159aa)
hypothetical protein n=1 Tax=Deinococcus aquatilis RepID=UPI0003643309
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABZ98267.1}; TaxID=456481 species="Bacteria; Spirochaetes; Leptospirales; Leptospiraceae; Leptospira.;" source="Leptospira biflexa serovar Patoc (strain Patoc 1 / ATCC 23582 /; Paris).;"
SCNpilot_cont_500_bf_scaffold_3253_28
GWC2_Nitrospirae_42_7_curated, Nitrospirae, Bacteria

Not on your lists

22989..23216
DNA (228bp) protein (76aa)
Putative uncharacterized protein id=3362451 bin=GWC2_CP_Nitrospirae-rel_42_7 species=Candidatus Kuenenia stuttgartiensis genus=Candidatus Kuenenia taxon_order=Candidatus Brocadiales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWC2_CP_Nitrospirae-rel_42_7 organism_group=Nitrospirae
hypothetical protein
Tax=GWC2_Nitrospirae_42_7_curated
SCNpilot_cont_500_bf_scaffold_3253_29
Spirosoma linguale, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

23213..23557
DNA (345bp) protein (115aa)
Uncharacterized protein n=1 Tax=Spirosoma linguale (strain ATCC 33905 / DSM 74 / LMG 10896) RepID=D2QRR6_SPILD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADB41498.1}; TaxID=504472 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma linguale (strain ATCC 33905 / DSM 74 / LMG 10896).;"
SCNpilot_cont_500_bf_scaffold_3253_30
unknown

Not on your lists

23899..24330
DNA (432bp) protein (144aa)

This feature has no annotations

Displaying items 1-30 of 31 in total

View Taxonomy