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SCNpilot_cont_500_bf_scaffold_3312

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Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_500_bf_scaffold_3312_1
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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comp(1..594)
DNA (594bp) protein (198aa)
acyl-(acyl-carrier-protein)--UDP-N-acetylglucosamine O-acyltransferase; K00677 UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129]
Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase {ECO:0000256|SAAS:SAAS00064156}; EC=2.3.1.129 {ECO:0000256|SAAS:SAAS00001267};; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
Acyl-(Acyl-carrier-protein)--UDP-N-acetylglucosamine O-acyltransferase n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TP62_NIAKG
SCNpilot_cont_500_bf_scaffold_3312_2
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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comp(728..2134)
DNA (1407bp) protein (469aa)
UDP-3-O-(3-hydroxymyristoyl) N-acetylglucosamine deacetylase, 3-hydroxyacyl-(acyl-carrier-protein) dehydratase; K02372 3R-hydroxymyristoyl ACP dehydrase [EC:4.2.1.-]; K02535 UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase [EC:3.5.1.108] rbh
3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ {ECO:0000256|SAAS:SAAS00064869}; EC=3.5.1.- {ECO:0000256|SAAS:SAAS00041386};; EC=4.2.1.59 {ECO:0000256|SAAS:SAAS00064862};; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase {ECO:0000256|SAAS:SAAS00041388}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
UDP-3-O-(3-hydroxymyristoyl) N-acetylglucosamine deacetylase, 3-hydroxyacyl-(Acyl-carrier-protein) dehydratase n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TP63_NIAKG rbh
SCNpilot_cont_500_bf_scaffold_3312_3
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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comp(2183..2614)
DNA (432bp) protein (144aa)
Chaperonin Cpn10 n=1 Tax=Niabella soli DSM 19437 RepID=H1NPX5_9SPHI
Chaperonin {ECO:0000313|EMBL:AHF14893.1}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
chaperonin Cpn10
SCNpilot_cont_500_bf_scaffold_3312_4
Flavihumibacter petaseus, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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2663..3373
DNA (711bp) protein (237aa)
Two component transcriptional regulator, winged helix family n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TP51_NIAKG rbh
Putative two-component response regulator {ECO:0000313|EMBL:GAO45042.1}; TaxID=1220578 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter petaseus NBRC 106054.;"
two component transcriptional regulator, winged helix family rbh
SCNpilot_cont_500_bf_scaffold_3312_5
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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comp(3404..4435)
DNA (1032bp) protein (344aa)
Holliday junction DNA helicase subunit RuvB; K03551 holliday junction DNA helicase RuvB [EC:3.6.4.12] rbh
Holliday junction ATP-dependent DNA helicase RuvB {ECO:0000256|HAMAP-Rule:MF_00016}; EC=3.6.4.12 {ECO:0000256|HAMAP-Rule:MF_00016};; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
Holliday junction ATP-dependent DNA helicase RuvB n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TP50_NIAKG rbh
SCNpilot_cont_500_bf_scaffold_3312_6
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

4495..5142
DNA (648bp) protein (216aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI0003602CBC
coenzyme F420-dependent NADP oxidoreductase; K06988
NADP oxidoreductase coenzyme F420-dependent {ECO:0000313|EMBL:AEW03167.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
SCNpilot_cont_500_bf_scaffold_3312_7
Pedobacter sp. V48, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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comp(5177..6157)
DNA (981bp) protein (327aa)
methyltransferase n=1 Tax=Cytophagales str. B6 RepID=UPI0003B700E3 rbh
Uncharacterized protein {ECO:0000313|EMBL:ETZ20907.1}; TaxID=509635 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter sp. V48.;"
hypothetical protein rbh
SCNpilot_cont_500_bf_scaffold_3312_8
Vitellibacter vladivostokensis, Vitellibacter, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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comp(6189..7433)
DNA (1245bp) protein (415aa)
hypothetical protein n=1 Tax=Flavobacterium antarcticum RepID=UPI0003B5E438
Sulfatase maturase {ECO:0000313|EMBL:KJJ37809.1}; TaxID=171194 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Vitellibacter.;" source="Vitellibacter vladivostokensis.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_3312_9
Sphingobacterium sp. 21, Sphingobacterium, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(7614..8972)
DNA (1359bp) protein (453aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI000362E22A rbh
glycine/betaine ABC transporter periplasmic protein; K05845 osmoprotectant transport system substrate-binding protein; K05846 osmoprotectant transport system permease protein rbh
ABC-type glycine betaine transport, periplasmic subunit {ECO:0000313|EMBL:ADZ79118.1}; TaxID=743722 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" source="Sphingobacterium sp. (strain 21).;"
SCNpilot_cont_500_bf_scaffold_3312_10
Mucilaginibacter paludis, Mucilaginibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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comp(9002..9805)
DNA (804bp) protein (268aa)
glycine/betaine ABC transporter ATP-binding protein n=1 Tax=Cytophagales str. B6 RepID=UPI0003B624FA rbh
ABC transporter related protein {ECO:0000313|EMBL:EHQ26709.1}; TaxID=714943 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Mucilaginibacter.;" source="Mucilaginibacter paludis DSM 18603.;"
ABC transporter; K05847 osmoprotectant transport system ATP-binding protein rbh
SCNpilot_cont_500_bf_scaffold_3312_11
Pedobacter kyungheensis, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(9822..10733)
DNA (912bp) protein (304aa)
merA3; mercuric reductase (EC:1.16.1.1)
Mercuric reductase n=1 Tax=Pedobacter sp. BAL39 RepID=A6EF08_9SPHI
Mercuric reductase {ECO:0000313|EMBL:KIA96373.1}; TaxID=1069985 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter kyungheensis.;"
Displaying 11 items

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