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SCNpilot_cont_500_bf_scaffold_3316

Search features with annotation key words

Displaying 24 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_500_bf_scaffold_3316_1
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(3..2072)
DNA (2070bp) protein (690aa)
Capsular exopolysaccharide family {ECO:0000313|EMBL:AEW02970.1}; EC=2.7.10.2 {ECO:0000313|EMBL:AEW02970.1};; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
Capsular exopolysaccharide family n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TK32_NIAKG rbh
capsular exopolysaccharide family protein rbh
SCNpilot_cont_500_bf_scaffold_3316_2
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(2090..2932)
DNA (843bp) protein (281aa)
Soluble ligand binding domain protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TK31_NIAKG
Soluble ligand binding domain-containing protein; K01991 polysaccharide export outer membrane protein
Soluble ligand binding domain protein {ECO:0000313|EMBL:AEW02969.1}; Flags: Precursor;; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
SCNpilot_cont_500_bf_scaffold_3316_3
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(2968..3474)
DNA (507bp) protein (169aa)
NusG antitermination factor n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TK30_NIAKG
NusG antitermination factor
NusG antitermination factor {ECO:0000313|EMBL:AEW02968.1}; Flags: Precursor;; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
SCNpilot_cont_500_bf_scaffold_3316_4
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(3840..4304)
DNA (465bp) protein (155aa)
Uncharacterized protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TK28_NIAKG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEW02966.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
SCNpilot_cont_500_bf_scaffold_3316_5
unknown

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comp(4246..4371)
DNA (126bp) protein (42aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_3316_6
Microscilla marina, Microscilla, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(4465..5811)
DNA (1347bp) protein (449aa)
Putative ribonucleoprotein-related protein n=1 Tax=Microscilla marina ATCC 23134 RepID=A1ZMP7_9BACT
Putative ribonucleoprotein-related protein {ECO:0000313|EMBL:EAY28427.1}; TaxID=313606 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Microscilla.;" source="Microscilla marina ATCC 23134.;"
TROVE domain-containing protein
SCNpilot_cont_500_bf_scaffold_3316_7
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(6170..8326)
DNA (2157bp) protein (719aa)
Multi-sensor hybrid histidine kinase n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TDQ2_NIAKG rbh
multi-sensor hybrid histidine kinase rbh
Multi-sensor hybrid histidine kinase {ECO:0000313|EMBL:AEW01502.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
SCNpilot_cont_500_bf_scaffold_3316_8
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

8432..8830
DNA (399bp) protein (133aa)
Hpt domain protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TDQ3_NIAKG
Hpt domain-containing protein
Hpt domain protein {ECO:0000313|EMBL:AEW01503.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
SCNpilot_cont_500_bf_scaffold_3316_9
Terriglobus saanensis, Terriglobus, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

comp(8837..9967)
DNA (1131bp) protein (377aa)
Aminotransferase class I and II n=1 Tax=Terriglobus saanensis (strain ATCC BAA-1853 / DSM 23119 / SP1PR4) RepID=E8V3H0_TERSS
class I/II aminotransferase
Aminotransferase class I and II {ECO:0000313|EMBL:ADV83583.1}; TaxID=401053 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Terriglobus.;" source="Terriglobus saanensis (strain ATCC BAA-1853 / DSM 23119 / SP1PR4).;"
SCNpilot_cont_500_bf_scaffold_3316_10
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

10193..10636
DNA (444bp) protein (148aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI0003700D0F
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEV98007.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
SCNpilot_cont_500_bf_scaffold_3316_11
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(11092..12246)
DNA (1155bp) protein (385aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI000366E4FF rbh
radical SAM protein
Radical SAM domain protein {ECO:0000313|EMBL:AEW02952.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
SCNpilot_cont_500_bf_scaffold_3316_12
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(12267..13040)
DNA (774bp) protein (258aa)
Uncharacterized protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TK13_NIAKG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEW02951.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
SCNpilot_cont_500_bf_scaffold_3316_13
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(13069..13740)
DNA (672bp) protein (224aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI0003644DC1
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEW02950.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
SCNpilot_cont_500_bf_scaffold_3316_14
Flavihumibacter sp. ZG627, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

13815..14249
DNA (435bp) protein (145aa)
SOS response UmuD protein; K03503 DNA polymerase V [EC:3.4.21.-]
DNA repair protein n=1 Tax=Segetibacter koreensis RepID=UPI000363E3CA
Peptidase S24 {ECO:0000313|EMBL:KIC92240.1}; TaxID=1463156 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter sp. ZG627.;"
SCNpilot_cont_500_bf_scaffold_3316_15
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

14257..15540
DNA (1284bp) protein (428aa)
DNA-directed DNA polymerase {ECO:0000313|EMBL:AEW02948.1}; EC=2.7.7.7 {ECO:0000313|EMBL:AEW02948.1};; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
DNA-directed DNA polymerase n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TK10_NIAKG rbh
DNA-directed DNA polymerase; K03502 DNA polymerase V rbh
SCNpilot_cont_500_bf_scaffold_3316_16
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

15680..16234
DNA (555bp) protein (185aa)
RNA polymerase, sigma-24 subunit, ECF subfamily n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TK08_NIAKG
ECF subfamily RNA polymerase sigma-24 subunit
RNA polymerase, sigma-24 subunit, ECF subfamily {ECO:0000313|EMBL:AEW02946.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
SCNpilot_cont_500_bf_scaffold_3316_17
Fibrisoma limi, Fibrisoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

16247..17209
DNA (963bp) protein (321aa)
Uncharacterized protein n=1 Tax=Fibrisoma limi BUZ 3 RepID=I2GBZ5_9BACT
Uncharacterized protein {ECO:0000313|EMBL:CCH51419.1}; TaxID=1185876 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Fibrisoma.;" source="Fibrisoma limi BUZ 3.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_3316_18
unknown

Not on your lists

17394..17912
DNA (519bp) protein (173aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_3316_19
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(18147..20600)
DNA (2454bp) protein (818aa)
40-residue YVTN family beta-propeller repeat protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TIQ1_NIAKG rbh
40-residue YVTN family beta-propeller repeat-containing protein rbh
40-residue YVTN family beta-propeller repeat protein {ECO:0000313|EMBL:AEW02904.1}; Flags: Precursor;; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
SCNpilot_cont_500_bf_scaffold_3316_20
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(20700..21440)
DNA (741bp) protein (247aa)
Nucleotidyl transferase n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TIQ2_NIAKG
nucleotidyltransferase
Nucleotidyl transferase {ECO:0000313|EMBL:AEW02905.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
SCNpilot_cont_500_bf_scaffold_3316_21
Pedobacter heparinus, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(21512..22021)
DNA (510bp) protein (170aa)
Putative uncharacterized protein n=1 Tax=Pedobacter heparinus (strain ATCC 13125 / DSM 2366 / NCIB 9290) RepID=C6Y375_PEDHD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACU05300.1}; TaxID=485917 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter heparinus (strain ATCC 13125 / DSM 2366 / NCIB 9290).;"
SCNpilot_cont_500_bf_scaffold_3316_22
Shewanella sp. cp20, Shewanella, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22178..23734
DNA (1557bp) protein (519aa)
Two-component system sensor histidine kinase/response n=1 Tax=Pseudoalteromonas undina NCIMB 2128 RepID=U1L5Y3_9GAMM
Diguanylate cyclase {ECO:0000313|EMBL:KIO37468.1}; TaxID=1521167 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Shewanellaceae; Shewanella.;" source="Shewanella sp. cp20.;"
periplasmic ligand-binding sensor domain protein
SCNpilot_cont_500_bf_scaffold_3316_23
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

23810..25204
DNA (1395bp) protein (465aa)
Putative periplasmic ligand-binding sensor domain protein id=3975541 bin=GWF2_Ignavibacteria_35_20 species=RAAC39 genus=RAAC39 taxon_order=RAAC39 taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWF2_Ignavibacteria_35_20 organism_group=Ignavibacteria
putative signal transduction histidine kinase
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
SCNpilot_cont_500_bf_scaffold_3316_24
unknown

Not on your lists

25217..25447
DNA (231bp) protein (77aa)

This feature has no annotations

Displaying 24 items

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